RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 ELFN2Q5R3F8 820 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF793Q6ZN11 406 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 Q6ZS92 163 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 AGBL5Q8NDL9 886 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR4C15Q8NGM1 316 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 HAVCR2Q8TDQ0 301 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MARS2Q96GW9 593 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 LRR1Q96L50 414 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 C12orf66Q96MD2 445 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 POLDIP3Q9BY77 421 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CHST5Q9GZS9 411 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 XKR8Q9H6D3 395 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF552Q9H707 407 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 DHCR7Q9UBM7 475 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 VPS29Q9UBQ0 182 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 DLGAP4Q9Y2H0 992 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 PCNX3Q9H6A9 2034 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 A8MXE2 369 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 H7C417 338 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GLSO94925 669 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 HOXB5P09067 269 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 EDN3P14138 238 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TMEM11P17152 192 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 HOXA5P20719 270 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TACR1P25103 407 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ABCD3P28288 659 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 DEFA5Q01523 94 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CEACAM20Q6UY09 585 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF813Q6ZN06 617 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GALNT5Q7Z7M9 940 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 NAA40Q86UY6 237 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ZDHHC21Q8IVQ6 265 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RAB42Q8N4Z0 105 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR2T35Q8NGX2 323 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR4K15Q8NH41 348 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 PNPLA2Q96AD5 504 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RSPO3Q9BXY4 272 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ACPTQ9BZG2 426 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MRPS18AQ9NVS2 196 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MRTO4Q9UKD2 239 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MRPS18CQ9Y3D5 142 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 YLPM1P49750 1951 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MAGEB17A8MXT2 336 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 C1orf196B1AJZ1 125 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 H7C1Q1 480 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 AP4M1O00189 453 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CTDSPLO15194 276 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 SRPX2O60687 465 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TBX19O60806 448 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MBP02144 154 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR4E1P0C645 316 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ACPPP15309 386 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 AHRP35869 848 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 RPS13P62277 151 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TBPL1P62380 186 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GAB1Q13480 694 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MED27Q6P2C8 311 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 KIRREL2Q6UWL6 708 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GSG1LQ6UXU4 331 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TPRA1Q86W33 373 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 CBLN2Q8IUK8 224 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 GID4Q8IVV7 300 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 ZNF527Q8NB42 609 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR10H5Q8NGA6 315 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OR5R1Q8NH85 324 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 POC1BQ8TC44 478 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 KCTD12Q96CX2 325 aaKnown RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MISP3Q96FF7 219 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 OPN3Q9H1Y3 402 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TEX10Q9NXF1 929 aaPredicted RBP6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TAC3Q9UHF0 121 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 MYO18BQ8IUG5 2567 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 DSPPQ9NZW4 1301 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TACC2O95359 2948 aa6.22□□□□□ -1.41
CSDE1-204ENST00000369530 TRBC2A0A5B9 178 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 GPR31O00270 319 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 AKR7A3O95154 331 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 CDRT1O95170 752 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 IL5P05113 134 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 PTGDSP41222 190 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 RAB5CP51148 216 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 RAB2AP61019 212 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 MRPS11P82912 194 aaKnown RBP6.21□□□□□ -1.41
CSDE1-204ENST00000369530 HGFACQ04756 655 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 TNFRSF9Q07011 255 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 MPPED2Q15777 294 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 RNASE10Q5GAN6 216 aaKnown RBP6.21□□□□□ -1.41
CSDE1-204ENST00000369530 PYY3Q5JQD4 70 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 LIPNQ5VXI9 398 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 ADNP2Q6IQ32 1131 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 PRSS41Q7RTY9 318 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 DPPA2Q7Z7J5 298 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 C17orf64Q86WR6 236 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 PNLDC1Q8NA58 520 aaKnown RBP6.21□□□□□ -1.41
CSDE1-204ENST00000369530 OR2Y1Q8NGV0 311 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 OR10G6Q8NH81 332 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 GNPDA2Q8TDQ7 276 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 STK35Q8TDR2 534 aa6.21□□□□□ -1.41
CSDE1-204ENST00000369530 IGFBPL1Q8WX77 278 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms