RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SAMD8Q96LT4 415 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 IP6K3Q96PC2 410 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 FN3KQ9H479 309 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 ETAA1Q9NY74 926 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 TAS2R10Q9NYW0 307 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 FAM30AQ9NZY2 134 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 PPP4R1LQ9P1A2 415 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 ERVK-18Q9QC07 812 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 DNAJB11Q9UBS4 358 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 WIF1Q9Y5W5 379 aa7.86□□□□□ -1.15
TPM3-213ENST00000368545 IGKV1D-42A0A075B6H8 117 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CCDC160A6NGH7 325 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF701M0R085 212 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 ADAM10O14672 748 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ENTPD6O75354 484 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SLC25A12O75746 678 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 NDUFB2O95178 105 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 MT-ND2P03891 347 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CLEC3BP05452 202 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CXCR1P25024 350 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SLC6A6P31641 620 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SOX3P41225 446 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SLC15A1P46059 708 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 NUDT6P53370 316 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 DLX5P56178 289 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 FXYD6P3P58550 94 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 PMS2P3Q13401 168 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 QPRTQ15274 297 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 NRN1LQ496H8 165 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SYT14P1Q58G82 188 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RPUSD3Q6P087 351 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 ARHGAP11AQ6P4F7 1023 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 OR10G3Q8NGC4 313 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 OR13F1Q8NGS4 319 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 OR4Q3Q8NH05 313 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF420Q8TAQ5 688 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 ABHD5Q8WTS1 349 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RFKQ969G6 155 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 LURAP1Q96LR2 239 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 TEX15Q9BXT5 2789 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 BARX1Q9HBU1 254 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 DNAJC27Q9NZQ0 273 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 OSGIN1Q9UJX0 560 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 FBXL4Q9UKA2 621 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.85□□□□□ -1.15
TPM3-213ENST00000368545 KLF2Q9Y5W3 355 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 CPAMD8Q8IZJ3 1885 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 TRAV27A0A087WT01 109 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 KDM4EB2RXH2 506 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 NOL3O60936 208 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 CELA2AP08217 269 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 DBTP11182 482 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 SSTR2P30874 369 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CASP3P42574 277 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 MLF1P58340 268 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RPS4XP62701 263 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 EMX1Q04741 257 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 HGFACQ04756 655 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF91Q05481 1191 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CDC20Q12834 499 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF74Q16587 644 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 NXNL2Q5VZ03 156 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 SLC46A3Q7Z3Q1 461 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RPS19BP1Q86WX3 136 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 GID4Q8IVV7 300 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 AMER2Q8N7J2 671 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RORBQ92753 470 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF582Q96NG8 517 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 RHNO1Q9BSD3 238 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 IFT27Q9BW83 186 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 FKRPQ9H9S5 495 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 MCCC2Q9HCC0 563 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 GALNT9Q9HCQ5 603 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 NANSQ9NR45 359 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CMC2Q9NRP2 79 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 P4HTMQ9NXG6 502 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 GPR83Q9NYM4 423 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 PLA2G3Q9NZ20 509 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 RSL24D1Q9UHA3 163 aaKnown RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 ZNF229Q9UJW7 825 aa7.85□□□□□ -1.15
TPM3-213ENST00000368545 CHCHD2Q9Y6H1 151 aaPredicted RBP7.85□□□□□ -1.15
TPM3-213ENST00000368545 PCNX3Q9H6A9 2034 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 ZNF99A8MXY4 864 aaPredicted RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 ETV2O00321 342 aaPredicted RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 SEC14L2O76054 403 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 FADS2O95864 444 aaKnown RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 CH25HO95992 272 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 MT-ATP6P00846 226 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 SERPINA7P05543 415 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 FUT1P19526 365 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 ARL3P36405 182 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 PTGDSP41222 190 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 APOBEC1P41238 236 aaKnown RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 ZNF41P51814 821 aaPredicted RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 SRSF3P84103 164 aaKnown RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 PIGFQ07326 219 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 ST3GAL4Q11206 333 aa7.84□□□□□ -1.15
TPM3-213ENST00000368545 TOMM34Q15785 309 aaPredicted RBP7.84□□□□□ -1.15
TPM3-213ENST00000368545 KLHL22Q53GT1 634 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 148.6 ms