RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 FKBP7Q9Y680 259 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 F8W036 122 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 IMPA2O14732 288 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 TOX3O15405 576 aaPredicted RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 HCN1O60741 890 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 AK1P00568 194 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 MT-ND5P03915 603 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 KLK3P07288 261 aaPredicted RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 ANKRD34CP0C6C1 535 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 FOSL1P15407 271 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 DRD5P21918 477 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 OTX2P32243 289 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 CCR6P51684 374 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 OR10A3P58181 314 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 CRMP1Q14194 572 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 OTPQ5XKR4 325 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 TMEM88Q6PEY1 159 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 NLRC3Q7RTR2 1065 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 NAXDQ8IW45 347 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 BOLLQ8N9W6 283 aaKnown RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 DUSP19Q8WTR2 217 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 NXPE2Q96DL1 559 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 C4orf36Q96KX1 117 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 SFXN2Q96NB2 322 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 TNFRSF13CQ96RJ3 184 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 CMKLR1Q99788 373 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 LDAHQ9H6V9 325 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.66□□□□□ -0.86
TPM3-212ENST00000368533 RASD1Q9Y272 281 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 VDAC3Q9Y277 283 aa9.66□□□□□ -0.86
TPM3-212ENST00000368533 MFSD2BA6NFX1 497 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ATG12O94817 140 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 JMJD7P0C870 316 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 PEPDP12955 493 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 F8A1P23610 371 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR12D2P58182 307 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 E2F1Q01094 437 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 PRAMEF20Q5VT98 475 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 C1QL3Q5VWW1 255 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZNF385CQ66K41 422 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 CD200R1LQ6Q8B3 271 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 RAB11FIP2Q7L804 512 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 CARFQ8N187 725 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ARIH2OSQ8N7S6 290 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR14A16Q8NHC5 309 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 SLC39A7Q92504 469 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZFP3Q96NJ6 502 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 DDOQ99489 341 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 TEAD3Q99594 435 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 LPAR4Q99677 370 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR51J1Q9H342 316 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 EXOGQ9Y2C4 368 aaKnown RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 CACNA1GO43497 2377 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 PDCD5O14737 125 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 SSNA1O43805 119 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR2J2O76002 312 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 TBXA2RP21731 343 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 RPL4P36578 427 aaKnown RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 NAA10P41227 235 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 SELENOPP49908 381 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZNF117Q03924 483 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZFP36L1Q07352 338 aaKnown RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 MELKQ14680 651 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 SYT9Q86SS6 491 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 PM20D2Q8IYS1 436 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZNF485Q8NCK3 441 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR5M1Q8NGP8 315 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR13C5Q8NGS8 318 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 OR4K13Q8NH42 304 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 C2CD4CQ8TF44 421 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ZMYND19Q96E35 227 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 ERMAPQ96PL5 475 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 WDR77Q9BQA1 342 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 METTL17Q9H7H0 456 aaPredicted RBP9.65□□□□□ -0.86
TPM3-212ENST00000368533 UBQLN4Q9NRR5 601 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 ASB6Q9NWX5 421 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 GPR160Q9UJ42 338 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 LHX6Q9UPM6 363 aa9.65□□□□□ -0.86
TPM3-212ENST00000368533 SPENQ96T58 3664 aaKnown RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 DNASE2O00115 360 aaPredicted RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 EEF1E1O43324 174 aaKnown RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 KLF4O43474 513 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 STK17BO94768 372 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 IGHA1P01876 353 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 FXYD6P3P58550 94 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 TSPAN5P62079 268 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 TP53I3Q53FA7 332 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 SLC6A19Q695T7 634 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 HDDC2Q7Z4H3 204 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 CPEB2Q7Z5Q1 589 aaKnown RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 CLRN3Q8NCR9 226 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 OR52E2Q8NGJ4 325 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 OR2T4Q8NH00 348 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 NANPQ8TBE9 248 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 SMPDL3BQ92485 455 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 HSD17B8Q92506 261 aa9.65□□□□□ -0.87
TPM3-212ENST00000368533 KIAA1143Q96AT1 154 aaPredicted RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 ZC3HAV1LQ96H79 300 aaKnown RBP9.65□□□□□ -0.87
TPM3-212ENST00000368533 PELOQ9BRX2 385 aaKnown RBP9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms