RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 ZC3HAV1LQ96H79 300 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 LRR1Q96L50 414 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 RBP7Q96R05 134 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 NMNAT3Q96T66 252 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 SLC29A1Q99808 456 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 MRPL13Q9BYD1 178 aaKnown RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 RIBC2Q9H4K1 309 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 TAS2R16Q9NYV7 291 aa12.23□□□□□ -0.45
TPM3-211ENST00000368531 TMEFF2Q9UIK5 374 aaPredicted RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 KLF2Q9Y5W3 355 aaPredicted RBP12.23□□□□□ -0.45
TPM3-211ENST00000368531 A0A096LPE4 126 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 IGKV1D-43A0A0B4J1Z2 117 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 A0A1W2PPZ6 126 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 A0A1W2PR80 420 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 PRSS37A4D1T9 235 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 ARPC3O15145 178 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 SLC2A10O95528 541 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 TXNDC12O95881 172 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 APEHP13798 732 aaKnown RBP12.22□□□□□ -0.45
TPM3-211ENST00000368531 COX5AP20674 150 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 CCKARP32238 428 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 POLR2IP36954 125 aaKnown RBP12.22□□□□□ -0.45
TPM3-211ENST00000368531 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.22□□□□□ -0.45
TPM3-211ENST00000368531 STK11Q15831 433 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 PGGHGQ32M88 737 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 ACSM5Q6NUN0 579 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 SLC27A4Q6P1M0 643 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 LEG1Q6P5S2 330 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 MEX3BQ6ZN04 569 aaKnown RBP12.22□□□□□ -0.45
TPM3-211ENST00000368531 LNX2Q8N448 690 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 GALNT4Q8N4A0 578 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 SDR9C7Q8NEX9 313 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 HTRA1Q92743 480 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 S100PBPQ96BU1 408 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 ALG12Q9BV10 488 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 ACTR6Q9GZN1 396 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 FN3KQ9H479 309 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 BAIAP2Q9UQB8 552 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 GPR52Q9Y2T5 361 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 RRP15Q9Y3B9 282 aaKnown RBP12.22□□□□□ -0.45
TPM3-211ENST00000368531 ORC6Q9Y5N6 252 aa12.22□□□□□ -0.45
TPM3-211ENST00000368531 SLC22A23A1A5C7 686 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 TUBAL3A6NHL2 446 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 DHHO43323 396 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 IDH3BO43837 385 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 RENP00797 406 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 ALPLP05186 524 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 PSMB1P20618 241 aaKnown RBP12.21□□□□□ -0.45
TPM3-211ENST00000368531 PEX2P28328 305 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 EPHA2P29317 976 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 GIPRP48546 466 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 CENPAP49450 140 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 ALDH3A2P51648 485 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 CDK5Q00535 292 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 TGFBR3Q03167 851 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 PTGES3Q15185 160 aaKnown RBP12.21□□□□□ -0.45
TPM3-211ENST00000368531 ETFDHQ16134 617 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 SP5Q6BEB4 398 aaPredicted RBP12.21□□□□□ -0.45
TPM3-211ENST00000368531 PARP8Q8N3A8 854 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 CYB561A3Q8NBI2 242 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 STEAP2Q8NFT2 490 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 OTULINQ96BN8 352 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 FOXN4Q96NZ1 517 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 WFIKKN1Q96NZ8 548 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 TSSK2Q96PF2 358 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 PSMG3-AS1Q96PY0 264 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 HDHD5Q9BXW7 423 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 SYT4Q9H2B2 425 aa12.21□□□□□ -0.45
TPM3-211ENST00000368531 SRA1Q9HD15 236 aaKnown RBP12.21□□□□□ -0.45
TPM3-211ENST00000368531 A0A1W2PPL8 197 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 CENPBD1B2RD01 187 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 RPL36A-HNRNPH2H7BZ11 118 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 SLC16A7O60669 478 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 CDAP32320 146 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 GRK5P34947 590 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 ZNF84P51523 738 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 ESRRGP62508 458 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 TUBA1BP68363 451 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 TUBA4AP68366 448 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 SLC34A1Q06495 639 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 GABRA6Q16445 453 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 HIST3H3Q16695 136 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 HIKESHIQ53FT3 197 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 THEM4Q5T1C6 240 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 HIST2H2BCQ6DN03 193 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 SLC25A47Q6Q0C1 308 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 KLHL24Q6TFL4 600 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 ZNF813Q6ZN06 617 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 C22orf34Q6ZV56 151 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 TUBA1AQ71U36 451 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 ADCK1Q86TW2 530 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 WFDC8Q8IUA0 241 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 OR1K1Q8NGR3 316 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 OR52N5Q8NH56 324 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 NMD3Q96D46 503 aaKnown RBP12.2□□□□□ -0.46
TPM3-211ENST00000368531 FOXB1Q99853 325 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 MED18Q9BUE0 208 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 SEC61A2Q9H9S3 476 aa12.2□□□□□ -0.46
TPM3-211ENST00000368531 RNPEPL1Q9HAU8 725 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms