RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PIPOXQ9P0Z9 390 aa12.94□□□□□ -0.34
CD48-201ENST00000368045 CDV3Q9UKY7 258 aaKnown RBP12.94□□□□□ -0.34
CD48-201ENST00000368045 NUP210LQ5VU65 1888 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 A0A087WV48 116 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 PLSCR5A0PG75 271 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 GGT3PA6NGU5 568 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 H7C1C5 153 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ICOSLGO75144 302 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 DDAH2O95865 285 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ALDOBP05062 364 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 NME1P15531 152 aaKnown RBP12.93□□□□□ -0.34
CD48-201ENST00000368045 IL12BP29460 328 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 KIR3DL2P43630 455 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 PSMA6P60900 246 aaKnown RBP12.93□□□□□ -0.34
CD48-201ENST00000368045 LCN6P62502 163 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 RPS15P62841 145 aaKnown RBP12.93□□□□□ -0.34
CD48-201ENST00000368045 SLC17A1Q14916 467 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 SGCBQ16585 318 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 C17orf82Q86X59 251 aaPredicted RBP12.93□□□□□ -0.34
CD48-201ENST00000368045 PRSS35Q8N3Z0 413 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ZNF321PQ8N8H1 164 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 RNF128Q8TEB7 428 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ZNF721Q8TF20 911 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ZDHHC12Q96GR4 267 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 RBP7Q96R05 134 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ADOQ96SZ5 270 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 OR8D2Q9GZM6 311 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 SYT4Q9H2B2 425 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 CUTCQ9NTM9 273 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 ZNF69Q9UC07 566 aa12.93□□□□□ -0.34
CD48-201ENST00000368045 TMEM131Q92545 1883 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 IGHV5-51A0A0C4DH38 117 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 UBE2QL1A1L167 161 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ALG1L2C9J202 215 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 HCRTR2O43614 444 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PDGFAP04085 211 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 MAS1P04201 325 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 GP1BBP13224 206 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 SSTR2P30874 369 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 DLX5P56178 289 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 RPL27P61353 136 aaKnown RBP12.92□□□□□ -0.34
CD48-201ENST00000368045 ROM1Q03395 351 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 RAB11BQ15907 218 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 WDR38Q5JTN6 314 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 SLC18B1Q6NT16 456 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 FAM198BQ6UWH4 519 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ZNF679Q8IYX0 411 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 CARFQ8N187 725 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ASB13Q8WXK3 278 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PIGKQ92643 395 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 TGM7Q96PF1 710 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 DHRS9Q9BPW9 319 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 VSX1Q9NZR4 365 aaPredicted RBP12.92□□□□□ -0.34
CD48-201ENST00000368045 NUP50Q9UKX7 468 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PCDHGA5Q9Y5G8 931 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PRSS37A4D1T9 235 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 OR6C65A6NJZ3 312 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 SLC17A2O00624 439 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 TSPAN2O60636 221 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 CTAG2O75638 210 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 SLC25A12O75746 678 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 IGHMP01871 453 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 CSF2RBP32927 897 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 OPCMLQ14982 345 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 POU4F3Q15319 338 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PCGF3Q3KNV8 242 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 TEX30Q5JUR7 227 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 HLA-DQA1Q5Y7H0 255 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 IDO2Q6ZQW0 420 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 COMMD7Q86VX2 200 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 PM20D2Q8IYS1 436 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 OR6N1Q8NGY5 312 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 OR10AC1Q8NH08 325 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ZNF519Q8TB69 540 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 LMX1AQ8TE12 382 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 TSEN15Q8WW01 171 aaKnown RBP12.92□□□□□ -0.34
CD48-201ENST00000368045 METTL21AQ8WXB1 218 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ZNF524Q96C55 264 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 CLIP3Q96DZ5 547 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 GSX2Q9BZM3 304 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 ELOVL3Q9HB03 270 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 KIF25Q9UIL4 384 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 B9D1Q9UPM9 204 aa12.92□□□□□ -0.34
CD48-201ENST00000368045 LOC100289279A0A1B0GTE1 492 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 A0A1B0GTH9 108 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 SHISA7A6NL88 538 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 SULT1C2O00338 296 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 PRKNO60260 465 aaPredicted RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 DXOO77932 396 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 RGS11O94810 467 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 AKAIN1P0CW23 69 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 POLR2HP52434 150 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 GFERP55789 205 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 EBPQ15125 230 aaKnown RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 KCTD18Q6PI47 426 aaPredicted RBP12.91□□□□□ -0.34
CD48-201ENST00000368045 C5orf46Q6UWT4 87 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 SLC36A1Q7Z2H8 476 aa12.91□□□□□ -0.34
CD48-201ENST00000368045 ZNF454Q8N9F8 522 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms