RNA–Protein interactions for RNA: ENST00000366742.5

MRPL55-215, Transcript of mitochondrial ribosomal protein L55, human

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-215	ENST00000366742	SYT14	Q8NB59	555 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZNF519	Q8TB69	540 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	MCHR2	Q969V1	340 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	ASB9	Q96DX5	294 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	KCNK17	Q96T54	332 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	GPA33	Q99795	319 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	THTPA	Q9BU02	230 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	SEC61A2	Q9H9S3	476 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	NOX3	Q9HBY0	568 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZNF701	Q9NV72	531 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZNF346	Q9UL40	294 aa	Known RBP	13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	SIGLEC7	Q9Y286	467 aa		13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.55	□□□□□ -0.24
MRPL55-215	ENST00000366742	VPS13C	Q709C8	3753 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	OVOL3	O00110	214 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	SMPD2	O60906	423 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	TMCC2	O75069	709 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	GADD45G	O95257	159 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	CD8A	P01732	235 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	HLA-H	P01893	362 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	CELA3B	P08861	270 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	CECR9	P0C854	216 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	B4GALT1	P15291	398 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	PGM2L1	Q6PCE3	622 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZER1	Q7Z7L7	766 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	DTX2	Q86UW9	622 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	MDP1	Q86V88	176 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	LRRC75A-AS1	Q8N1F1	130 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	ZNF75A	Q96N20	296 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	TSPAN32	Q96QS1	320 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	KATNB1	Q9BVA0	655 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	MOV10	Q9HCE1	1003 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	TMEM38B	Q9NVV0	291 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	STX18	Q9P2W9	335 aa	Known RBP	13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	MOK	Q9UQ07	419 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	LAMP3	Q9UQV4	416 aa		13.54	□□□□□ -0.24
MRPL55-215	ENST00000366742	IGKV1D-43	A0A0B4J1Z2	117 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	ATP6V1G2-DDX39B	F2Z307	99 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	RRM2	P31350	389 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	ARR3	P36575	388 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	HMGA2	P52926	109 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	FXYD6P3	P58550	94 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	ERVK-25	P63136	954 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	ADAM8	P78325	824 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	MYBPC1	Q00872	1141 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	NAAA	Q02083	359 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	BNIP1	Q12981	228 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	TOP3A	Q13472	1001 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	DNAL1	Q4LDG9	190 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	C10orf128	Q5T292	105 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	FAM122B	Q7Z309	247 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	SKA3	Q8IX90	412 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	SLC22A24	Q8N4F4	322 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	FGFBP3	Q8TAT2	258 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	TMEM171	Q8WVE6	324 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	CCDC124	Q96CT7	223 aa	Known RBP	13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	DHRS9	Q9BPW9	319 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	TRAF4	Q9BUZ4	470 aa	Predicted RBP	13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	ALG12	Q9BV10	488 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	GSX2	Q9BZM3	304 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	GRIP2	Q9C0E4	1043 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	MAGIX	Q9H6Y5	334 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	POU2F3	Q9UKI9	436 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	UGT2A1	Q9Y4X1	527 aa		13.53	□□□□□ -0.24
MRPL55-215	ENST00000366742	GYG2	O15488	501 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	CD14	P08571	375 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	CALCR	P30988	508 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	ACVR1B	P36896	505 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	CAPZA2	P47755	286 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	PTH2R	P49190	550 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	IDH3G	P51553	393 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	NKX6-1	P78426	367 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	FMOD	Q06828	376 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	TRAP1	Q12931	704 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	FAM205BP	Q63HN1	556 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	SLC25A47	Q6Q0C1	308 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	THSD4	Q6ZMP0	1018 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	TGIF2LY	Q8IUE0	185 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	DEPDC4	Q8N2C3	294 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	CLDN22	Q8N7P3	220 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	ARIH2OS	Q8N7S6	290 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	WFDC11	Q8NEX6	87 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	HTRA1	Q92743	480 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	RSRC1	Q96IZ7	334 aa	Known RBP	13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	GPX7	Q96SL4	187 aa	Predicted RBP	13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	BTBD10	Q9BSF8	475 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	SMURF2	Q9HAU4	748 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	ADAM18	Q9Y3Q7	739 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	LYVE1	Q9Y5Y7	322 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	ATP23	Q9Y6H3	246 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	ACAN	P16112	2415 aa		13.52	□□□□□ -0.25
MRPL55-215	ENST00000366742	UNC119B	A6NIH7	251 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742		A6NIZ1	184 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	KRT36	O76013	467 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	NDUFB2	O95178	105 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	SLC2A10	O95528	541 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	OR8G3P	P0DMU2	310 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	CD79A	P11912	226 aa		13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	ZNF14	P17017	642 aa	Predicted RBP	13.51	□□□□□ -0.25
MRPL55-215	ENST00000366742	TTK	P33981	857 aa		13.51	□□□□□ -0.25

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