RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 OXSR1O95747 527 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CALM1P0DP23 149 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CALM2P0DP24 149 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CALM3P0DP25 149 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TCP1P17987 556 aaKnown RBP0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HLA-DPA1P20036 260 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PCMT1P22061 227 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 STARD6P59095 220 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CBX3Q13185 183 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SLC15A2Q16348 729 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PGGHGQ32M88 737 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OR2G6Q5TZ20 316 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 FAM222AQ5U5X8 452 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MORN3Q6PF18 240 aaPredicted RBP0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 LINC00173Q6ZV60 143 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ADM2Q7Z4H4 148 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 KIAA1328Q86T90 577 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OR2L13Q8N349 312 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 UFD1Q92890 307 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TESK2Q96S53 571 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 RIT2Q99578 217 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 EXOSC4Q9NPD3 245 aaKnown RBP0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SLC17A5Q9NRA2 495 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MMP17Q9ULZ9 603 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TNS2Q63HR2 1409 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZSWIM8A7E2V4 1837 aa0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HELZ2Q9BYK8 2649 aaKnown RBP0.45□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZBED9Q6R2W3 1325 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 BAHCC1Q9P281 2608 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 IGHV1OR15-9A0A0B4J2B8 117 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ARHGEF35A5YM69 484 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZNF716A6NP11 495 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 E7EQL1 145 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CHST10O43529 356 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 KERAO60938 352 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OR4F21O95013 312 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OPN1MWP04001 364 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HSMCR30P0CW71 290 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OPN1MW2P0DN77 364 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OPN1MW3P0DN78 364 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HTR2AP28223 471 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 GCAP28676 217 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 FUSP35637 526 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MPV17P39210 176 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CEACAM6P40199 344 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 AQP2P41181 271 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 RPS14P62263 151 aaKnown RBP0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 IL1RL1Q01638 556 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SCRN3Q0VDG4 424 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SPP2Q13103 211 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 VGLL4Q14135 290 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PON3Q15166 354 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TATDN3Q17R31 274 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 KCTD21Q4G0X4 260 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TP53I3Q53FA7 332 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 LDLRAP1Q5SW96 308 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PLBD1Q6P4A8 553 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TMEM136Q6ZRR5 245 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 NCCRP1Q6ZVX7 275 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CATSPER4Q7RTX7 472 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SNX20Q7Z614 316 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PYROXD1Q8WU10 500 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SLC13A3Q8WWT9 602 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 KRT35Q92764 455 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SGK3Q96BR1 496 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 NEURL3Q96EH8 262 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 IP6K3Q96PC2 410 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CLCC1Q96S66 551 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZNF607Q96SK3 696 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ACAT2Q9BWD1 397 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CWC25Q9NXE8 425 aaPredicted RBP0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TERF2IPQ9NYB0 399 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TMOD2Q9NZR1 351 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 PSG8Q9UQ74 426 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 NUDCQ9Y266 331 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SIGLEC7Q9Y286 467 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZNF337Q9Y3M9 751 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 NACADO15069 1562 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 DOCK8Q8NF50 2099 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MSH6P52701 1360 aa0.44□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SPAG9O60271 1321 aaKnown RBP0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 A0A1W2PRQ8 180 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 TCRBV9S1A1TA0A576 114 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 C4orf51C9J302 202 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 SDHDO14521 159 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 POLR2DO15514 142 aaKnown RBP0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CHMP2AO43633 222 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CYB5R3P00387 301 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HLA-DQB1P01920 261 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZNF806P0C7X5 589 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 CCNB1P14635 433 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ZNF250P15622 560 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ADRA1AP35348 466 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 HSD17B2P37059 387 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 GSSP48637 474 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 IDH2P48735 452 aaKnown RBP0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 ACTN3Q08043 901 aaPredicted RBP0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MAB21L1Q13394 359 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 OR5I1Q13606 314 aa0.43□□□□□ -2.34
RNU6-1048P-201ENST00000364054 MAD2L1BPQ15013 274 aaPredicted RBP0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms