RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TUBGCP6Q96RT7 1819 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 SH3GL1Q99961 368 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 OSBPL10Q9BXB5 764 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 TM9SF3Q9HD45 589 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 SLC40A1Q9NP59 571 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 LHX9Q9NQ69 397 aa2.55□□□□□ -2
RNU6-560P-201ENST00000364007 DOCK8Q8NF50 2099 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 BRWD3Q6RI45 1802 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 CAMTA1Q9Y6Y1 1673 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 MN1Q10571 1320 aaPredicted RBP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PPIAL4EA0A075B759 164 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 HIDE1A8MVS5 230 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PPP1R2P9O14990 202 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 EIF3GO75821 320 aaKnown RBP eCLIP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 UTS2O95399 124 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 FGGP02679 453 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 ZDHHC11BP0C7U3 371 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PPIAL4FP0DN26 164 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 OMGP23515 440 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 HNRNPH3P31942 346 aaKnown RBP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 UBE2AP49459 152 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 SLC7A9P82251 487 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 ENPEPQ07075 957 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 ARHGAP19Q14CB8 494 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 LINC00483Q53H64 154 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 VAX1Q5SQQ9 334 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PRAMEF5Q5TYX0 476 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PRAMEF6Q5VXH4 476 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 RUFY3Q7L099 469 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 STRADAQ7RTN6 431 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 EGFL6Q8IUX8 553 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 UBE2J2Q8N2K1 259 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 FAM86B1Q8N7N1 296 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 CEP112Q8N8E3 955 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 OR10G2Q8NGC3 310 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 OR13C2Q8NGS9 318 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 PLPPR1Q8TBJ4 325 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 FBXO32Q969P5 355 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 BMFQ96LC9 184 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 WFIKKN1Q96NZ8 548 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 TSSK3Q96PN8 268 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 KCTD14Q9BQ13 255 aaPredicted RBP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 TCHPQ9BT92 498 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 RPF2Q9H7B2 306 aaKnown RBP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 INPP5EQ9NRR6 644 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 IKZF2Q9UKS7 526 aa2.54□□□□□ -2
RNU6-560P-201ENST00000364007 MRPS18BQ9Y676 258 aaKnown RBP2.54□□□□□ -2
RNU6-560P-201ENST00000364007 CARMIL3Q8ND23 1372 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 CENPJQ9HC77 1338 aaPredicted RBP2.53□□□□□ -2
RNU6-560P-201ENST00000364007 H0YHG0 523 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 AIREO43918 545 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 MED6O75586 246 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 C6orf47O95873 294 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 IGHDP01880 384 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 PRPS2P11908 318 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 NCF2P19878 526 aaPredicted RBP2.53□□□□□ -2
RNU6-560P-201ENST00000364007 CRYBB2P43320 205 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 TFPI2P48307 235 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 MNAT1P51948 309 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 UGT2B15P54855 530 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 GPX6P59796 221 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 PLP1P60201 277 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 KCNJ2P63252 427 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 EIF4EBP1Q13541 118 aaPredicted RBP2.53□□□□□ -2
RNU6-560P-201ENST00000364007 PON3Q15166 354 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 FAM83EQ2M2I3 478 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF836Q6ZNA1 936 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 Q6ZR03 302 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 ZNF493Q6ZR52 646 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 STMN2Q93045 179 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 CWH43Q9H720 699 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 METTL7AQ9H8H3 244 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 KLHL28Q9NXS3 571 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 COX16Q9P0S2 106 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 CD84Q9UIB8 345 aa2.53□□□□□ -2
RNU6-560P-201ENST00000364007 ENTPD5O75356 428 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 CST1P01037 141 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 SERPIND1P05546 499 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 RETP07949 1114 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 GNAO1P09471 354 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 AK4P27144 223 aaPredicted RBP2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 SERPINB5P36952 375 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 BST2Q10589 180 aaKnown RBP2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 DDX39BQ13838 428 aaKnown RBP2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 DNAJC24Q6P3W2 148 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 H2AFVQ71UI9 128 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 NIPA1Q7RTP0 329 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 ZNF695Q8IW36 515 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 OR1S2Q8NGQ3 325 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 SHC3Q92529 594 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 FOPNLQ96NB1 174 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 SH3GL3Q99963 347 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 NOX3Q9HBY0 568 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 PISDQ9UG56 409 aa2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 CSDC2Q9Y534 153 aaKnown RBP2.52□□□□□ -2.01
RNU6-560P-201ENST00000364007 CNTNAP1P78357 1384 aa2.51□□□□□ -2.01
RNU6-560P-201ENST00000364007 MROH7-TTC4A0A0A0MT08 1334 aa2.51□□□□□ -2.01
RNU6-560P-201ENST00000364007 IGKV2-28A0A075B6P5 120 aa2.51□□□□□ -2.01
RNU6-560P-201ENST00000364007 F6UB75 175 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms