RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 P2RY10O00398 339 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 SEMG1P04279 462 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 THBS1P07996 1170 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 TMEM225BP0DP42 221 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 EMDP50402 254 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 CAPZA1P52907 286 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 EEF1A2Q05639 463 aaKnown RBP12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZP2Q05996 745 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 LHX8Q68G74 356 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF529Q6P280 563 aa12.73□□□□□ -0.37
COL6A1-201ENST00000361866 MEIKINA0A087WXM9 373 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 A0A1B0GUH1 482 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 OR5K4A6NMS3 321 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 MED6O75586 246 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 C21orf58P58505 322 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 CYCSP99999 105 aaKnown RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 OR51T1Q8NGJ9 327 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 FBXO4Q9UKT5 387 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 GVINP1Q7Z2Y8 2422 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 BORCS7-ASMTA0A0B4J1R7 106 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 SEMA4FO95754 770 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 HERV-K104P61576 105 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 EBPQ15125 230 aaKnown RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 PRSS41Q7RTY9 318 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF679Q8IYX0 411 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 SLC2A12Q8TD20 617 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 GIMAP5Q96F15 307 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF638Q14966 1978 aaKnown RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 OR5H14A6NHG9 310 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 PLPP2O43688 288 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 EN2P19622 333 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 UBE2IP63279 158 aaKnown RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ZNF704Q6ZNC4 412 aaPredicted RBP12.72□□□□□ -0.37
COL6A1-201ENST00000361866 CMIPQ8IY22 773 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 PTP4A1Q93096 173 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 LINC00052Q96N35 136 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ARHGDIGQ99819 225 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ENKD1Q9H0I2 346 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 SERTAD3Q9UJW9 196 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 ENTPD2Q9Y5L3 495 aa12.72□□□□□ -0.37
COL6A1-201ENST00000361866 SULT1B1O43704 296 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 OLFM2O95897 454 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 PMP2P02689 132 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 CRABP1P29762 137 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 CAV2P51636 162 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 RBM39Q14498 530 aaKnown RBP12.71□□□□□ -0.37
COL6A1-201ENST00000361866 KIAA0907Q7Z7F0 614 aaPredicted RBP12.71□□□□□ -0.37
COL6A1-201ENST00000361866 OR1F2PQ96R84 312 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 SFXN1Q9H9B4 322 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 TAS2R5Q9NYW4 299 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 VSTM2BA6NLU5 285 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 SNAPINO95295 136 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 TUBG1P23258 451 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 NPY4RP50391 375 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 MEF2DQ14814 521 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 EEF1A1P5Q5VTE0 462 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 RCBTB1Q8NDN9 531 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 FGGYQ96C11 551 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 PRRG4Q9BZD6 226 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 KIR3DX1Q9H7L2 352 aa12.71□□□□□ -0.37
COL6A1-201ENST00000361866 STK17BO94768 372 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 SERPINA5P05154 406 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 GLP1RP43220 463 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 BTG2P78543 158 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 DUSP2Q05923 314 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 C2orf76Q3KRA6 126 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 FAM69BQ5VUD6 431 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 GPR139Q6DWJ6 353 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 LSMEM1Q8N8F7 131 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 MARC2Q969Z3 335 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 CXorf58Q96LI9 332 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 NXF5Q9H1B4 397 aaKnown RBP12.71□□□□□ -0.38
COL6A1-201ENST00000361866 DHCR7Q9UBM7 475 aaKnown RBP12.71□□□□□ -0.38
COL6A1-201ENST00000361866 SERGEFQ9UGK8 458 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 KCNG2Q9UJ96 466 aa12.71□□□□□ -0.38
COL6A1-201ENST00000361866 NPIPB8E9PQR5 432 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 NFATC4Q14934 902 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PEA15Q15121 130 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 PLEKHN1Q494U1 663 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 TMEM244Q5VVB8 128 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 CD300LDQ6UXZ3 194 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SYS1Q8N2H4 156 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 OR4K15Q8NH41 348 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 FAM174AQ8TBP5 190 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 STK35Q8TDR2 534 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 LINC00615Q96LM1 132 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 RPH3AQ9Y2J0 694 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 MRPS17Q9Y2R5 130 aaKnown RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 UTRNP46939 3433 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 LOC100289279A0A1B0GTE1 492 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.7□□□□□ -0.38
COL6A1-201ENST00000361866 P2RX6O15547 441 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 GPANK1O95872 356 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ADRB1P08588 477 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 SLC35E2P0CK97 266 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 MYOGP15173 224 aa12.7□□□□□ -0.38
COL6A1-201ENST00000361866 ZNF16P17020 682 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms