RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 COMMD7Q86VX2 200 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 TMEM104Q8NE00 496 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 HRH4Q9H3N8 390 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 STMND1H3BQB6 276 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 ANKRD9Q96BM1 317 aaPredicted RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 INTS12Q96CB8 462 aaKnown RBP18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLC5A10A0PJK1 596 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 A8MXE2 369 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 M0QYG6 137 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 GABRG2P18507 467 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 SSTR2P30874 369 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 FRMPD2BQ6IN97 320 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 Q96M85 177 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 ANKRD19PQ9H560 264 aa18.62■□□□□ 0.57
CDC42BPB-201ENST00000361246 FUOMA2VDF0 154 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 FGF17O60258 216 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 IL3RAP26951 378 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 RIPPLY1Q0D2K3 151 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 CNTN4Q8IWV2 1026 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 HPSE2Q8WWQ2 592 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 PLPPR2Q96GM1 343 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 BIRC8Q96P09 236 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 SPACA5Q96QH8 159 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 LRRC61Q9BV99 259 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 ADAM29Q9UKF5 820 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR6C65A6NJZ3 312 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 SRP14P37108 136 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 FOXK2Q01167 660 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 TEKQ02763 1124 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 GK2Q14410 553 aaPredicted RBP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 BRICD5Q6PL45 260 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 BRIX1Q8TDN6 353 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 PUS1Q9Y606 427 aaKnown RBP eCLIP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 HSPE1-MOB4S4R3N1 261 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 FAM221AA4D161 298 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 ANKRD61A6NGH8 418 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 SHC1P29353 583 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 ELAVL1Q15717 326 aaKnown RBP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR6T1Q8NGN1 323 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 SPINT2O43291 252 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 DNAJB5O75953 348 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 DAPP51397 102 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 HSF1Q00613 529 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 USP51Q70EK9 711 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 GLI4P10075 376 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 TCTEX1D2Q8WW35 142 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLCO4A1Q96BD0 722 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 MS4A6EQ96DS6 147 aa18.61■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZNF816-ZNF321PA0A0X1KG74 233 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 POM121CA8CG34 1229 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 GLRA1P23415 457 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 OPRL1P41146 370 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 TSPAN31Q12999 210 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 SPEM1Q8N4L4 309 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZNF321PQ8N8H1 164 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 ERVMER34-1Q9H9K5 563 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CTSFQ9UBX1 484 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR52A1Q9UKL2 312 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 A0A1W2PR48 441 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 HTR2CP28335 458 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CAMK2BQ13554 666 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 MSMO1Q15800 293 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 AARDQ4LEZ3 155 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZNF691Q5VV52 312 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 MAML2Q8IZL2 1156 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 DNAJC5GQ8N7S2 189 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 RBMXL1Q96E39 390 aaKnown RBP18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 RCE1Q9Y256 329 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLC22A20A6NK97 555 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CLDN24A6NM45 220 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 A8MVM7 634 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 DSCR3O14972 297 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CDC14BO60729 498 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CTGFP29279 349 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 CATR1Q13166 79 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 MFSD12Q6NUT3 480 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR14A2Q96R54 314 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 KIAA1456Q9P272 454 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 TBX21Q9UL17 535 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 TCTN3Q6NUS6 607 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 PRRT1Q99946 306 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 ZDHHC5Q9C0B5 715 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.6■□□□□ 0.579e-6■□□□□ 9.4
CDC42BPB-201ENST00000361246 TREM2Q9NZC2 230 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 IL1AP01583 271 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 SEMG1P04279 462 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR10J4P0C629 311 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 TAS2R31P59538 309 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 UBL7Q96S82 380 aaPredicted RBP18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 PDCD1LG2Q9BQ51 273 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 LIN7BQ9HAP6 207 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 GMDSO60547 372 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 NSA2O95478 260 aaKnown RBP18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 SLC35A2P78381 396 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 GPR176Q14439 515 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 GARNL3Q5VVW2 1013 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 OR8G2PQ6IF36 304 aa18.6■□□□□ 0.57
CDC42BPB-201ENST00000361246 GHSRQ92847 366 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms