RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 TOR1AO14656 332 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 HRO43593 1189 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 KCNK2O95069 426 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 FOLR3P41439 243 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 DIO1P49895 249 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 ACSM1Q08AH1 577 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 PLCXD3Q63HM9 321 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 PARM1Q6UWI2 310 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 SLC43A2Q8N370 569 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 SLCO5A1Q9H2Y9 848 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 NELFAQ9H3P2 528 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 COA3Q9Y2R0 106 aaPredicted RBP12.59□□□□□ -0.39
VCP-201ENST00000358901 METAP1P53582 386 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 ATP1B3P54709 279 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 HSD17B7P56937 341 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 MFAP5Q13361 173 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 PEA15Q15121 130 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 ZNF674Q2M3X9 581 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 MANEAQ5SRI9 462 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 C1orf140Q5VVS0 124 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 NKAIN2Q5VXU1 208 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 CCDC190Q86UF4 302 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 TEX19Q8NA77 164 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 HSD17B8Q92506 261 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 LUZP4Q9P127 313 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 OR52A1Q9UKL2 312 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 ARAP2Q8WZ64 1704 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 GVINP1Q7Z2Y8 2422 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 SCRG1O75711 98 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 STK17BO94768 372 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 IFNA17P01571 189 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 CXCL12P48061 93 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 TPMTP51580 245 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 C5orf46Q6UWT4 87 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 ORAI1Q96D31 301 aa12.59□□□□□ -0.39
VCP-201ENST00000358901 FGF20Q9NP95 211 aaPredicted RBP12.59□□□□□ -0.39
VCP-201ENST00000358901 NSG1A0A0A6YYJ2 146 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 CD300LBA8K4G0 201 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 PMS2P2O95744 297 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 OMGP23515 440 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 ZNF169Q14929 603 aaPredicted RBP12.58□□□□□ -0.39
VCP-201ENST00000358901 EBPQ15125 230 aaKnown RBP12.58□□□□□ -0.39
VCP-201ENST00000358901 FAAP20Q6NZ36 180 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 MOB3CQ70IA8 216 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 ADGRE4PQ86SQ3 457 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 ANGPTL5Q86XS5 388 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 OR56B2PQ8NGI1 322 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 RNF128Q8TEB7 428 aa12.58□□□□□ -0.39
VCP-201ENST00000358901 LOC102725191A0A1B0GVB3 256 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TLCD2A6NGC4 264 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 CCSO14618 274 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TNFRSF10CO14798 259 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TK1P04183 234 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 EIF4EP06730 217 aaKnown RBP12.58□□□□□ -0.4
VCP-201ENST00000358901 NME2P22392 152 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 CD1CP29017 333 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 KIR2DL3P43628 341 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 AGERQ15109 404 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 SLC16A12Q6ZSM3 486 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 RHOUQ7L0Q8 258 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 OR10R2Q8NGX6 335 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 EMC6Q9BV81 110 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TRIP11Q15643 1979 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 PCM1Q15154 2024 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TEX51A0A1B0GUA7 166 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ST6GAL1P15907 406 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 TGM1P22735 817 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 HTR5AP47898 357 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ZNF136P52737 540 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 RBM39Q14498 530 aaKnown RBP12.58□□□□□ -0.4
VCP-201ENST00000358901 FBXW12Q6X9E4 464 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ANKRD33Q7Z3H0 272 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 SUMF2Q8NBJ7 301 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 RADILQ96JH8 1075 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 METTL9Q9H1A3 318 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 FLVCR2Q9UPI3 526 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 OR51B4Q9Y5P0 310 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 A0A0A6YYJ9 748 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 PRAMEF27A3QJZ7 478 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 BET1O15155 118 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 GDF1P27539 372 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 UBE2MP61081 183 aaKnown RBP12.58□□□□□ -0.4
VCP-201ENST00000358901 PLA2G7Q13093 441 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ACTBL2Q562R1 376 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 PRAMEF9Q5VWM5 478 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ZNF845Q96IR2 970 aaPredicted RBP12.58□□□□□ -0.4
VCP-201ENST00000358901 RNF170Q96K19 258 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 ENKD1Q9H0I2 346 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 KCNE3Q9Y6H6 103 aa12.58□□□□□ -0.4
VCP-201ENST00000358901 AHCTF1Q8WYP5 2266 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 TXNL1O43396 289 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 DDAH2O95865 285 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 PMP2P02689 132 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 POU3F2P20265 443 aaPredicted RBP12.57□□□□□ -0.4
VCP-201ENST00000358901 CDK5R1Q15078 307 aa12.57□□□□□ -0.4
VCP-201ENST00000358901 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms