RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 COL9A1P20849 921 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 MPLP40238 635 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 TFPI2P48307 235 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 EMDP50402 254 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 DAPP51397 102 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 CCR6P51684 374 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 BCL7AQ4VC05 210 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RBMXL1Q96E39 390 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 SORCS2Q96PQ0 1159 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 OCSTAMPQ9BR26 566 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PGAP2Q9UHJ9 254 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 GMEB1Q9Y692 573 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 M0R082 166 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RNASET2O00584 256 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PLPP1O14494 284 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 FADS1O60427 444 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PRLHRP49683 370 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 EIF5AL1Q6IS14 154 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 METTL25Q8N6Q8 603 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF417Q8TAU3 575 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF587Q96SQ5 575 aaPredicted RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 POPDC3Q9HBV1 291 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM45AQ9NWC5 275 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 CLEC1BQ9P126 229 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 BTNL2Q9UIR0 455 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 NFAT5O94916 1531 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ITSN1Q15811 1721 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 MKRN2OSH3BPM6 223 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PRKYO43930 277 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 MED6O75586 246 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 OR8U8P0C7N1 319 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 CD27P26842 260 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ADH6P28332 368 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 LIM2P55344 173 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RPL7L1Q6DKI1 246 aaKnown RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 DEDD2Q8WXF8 326 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 GIMAP5Q96F15 307 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 AMDHD1Q96NU7 426 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RANBP9Q96S59 729 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 FZD7O75084 574 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 CTSLP07711 333 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ARL16Q0P5N6 197 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ADGRG5Q8IZF4 528 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 CPNE4Q96A23 557 aaPredicted RBP6.74□□□□□ -1.33
VPS13A-202ENST00000357409 SAMD10Q9BYL1 202 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 NT5DC2Q9H857 520 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 STEAP1Q9UHE8 339 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PCOLCE2Q9UKZ9 415 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 SRPK3Q9UPE1 567 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 RRADP55042 308 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 WNT4P56705 351 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 PYCR3Q53H96 274 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 MICAL3Q7RTP6 2002 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 COMMD7Q86VX2 200 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 ACY3Q96HD9 319 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 C1QTNF2Q9BXJ5 285 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 SLC22A13Q9Y226 551 aa6.74□□□□□ -1.33
VPS13A-202ENST00000357409 SOBPA7XYQ1 873 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 DNAJB6O75190 326 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 SLC34A2O95436 690 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 ATXN1LP0C7T5 689 aaKnown RBP6.73□□□□□ -1.33
VPS13A-202ENST00000357409 S100A12P80511 92 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 PAQR6Q6TCH4 344 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 SPNS3Q6ZMD2 512 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TGIF2LXQ8IUE1 241 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 RAB3CQ96E17 227 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 P4HTMQ9NXG6 502 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 HHLA2Q9UM44 414 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 KLHL33A6NCF5 533 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 CTNSO60931 367 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 ZNF728P0DKX0 622 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 DCKP27707 260 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 HOXD12P35452 270 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 GLYATL3Q5SZD4 288 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 C1orf210Q8IVY1 113 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 OR2T35Q8NGX2 323 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 OR14A2Q96R54 314 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 SLC19A3Q9BZV2 496 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 PELI2Q9HAT8 420 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 SLC35A3Q9Y2D2 325 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 A0A087WV62 115 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 CA5AP35218 305 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 FADDQ13158 208 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TMEM244Q5VVB8 128 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 ACOT7LQ6ZUV0 252 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 FAM219AQ8IW50 185 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 KIAA1958Q8N8K9 716 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TMIEQ8NEW7 156 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 FNDC8Q8TC99 324 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 CRYAAP02489 173 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 ICAM2P13598 275 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TAS2R20P59543 309 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TAF9Q16594 264 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 CREB3L2Q70SY1 520 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 TIPARPQ7Z3E1 657 aaKnown RBP6.73□□□□□ -1.33
VPS13A-202ENST00000357409 GHSRQ92847 366 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 SEC22CQ9BRL7 303 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 MMP25Q9NPA2 562 aa6.73□□□□□ -1.33
VPS13A-202ENST00000357409 IL37Q9NZH6 218 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms