RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SPHK1Q9NYA1 384 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 FBXO4Q9UKT5 387 aa15.97■□□□□ 0.15
COL27A1-201ENST00000356083 ALOX12BO75342 701 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 HPNP05981 417 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 CTSAP10619 480 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 SLC35A1P78382 337 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 TBPL2Q6SJ96 375 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 DVL3Q92997 716 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-201ENST00000356083 SLC45A1Q9Y2W3 748 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 NUMBLQ9Y6R0 609 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 CHD3Q12873 2000 aaKnown RBP15.96■□□□□ 0.15
COL27A1-201ENST00000356083 IGHV3-20A0A0C4DH32 117 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 ACKR3P25106 362 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 SPANXN5Q5MJ07 72 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 GFRALQ6UXV0 394 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 PDZD3Q86UT5 571 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 OR5M9Q8NGP3 310 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 OR52A5Q9H2C5 316 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF281Q9Y2X9 895 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 WNK2Q9Y3S1 2297 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 DNPH1O43598 174 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 DHRS7BQ6IAN0 325 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-201ENST00000356083 NCCRP1Q6ZVX7 275 aaPredicted RBP15.96■□□□□ 0.15
COL27A1-201ENST00000356083 SCPEP1Q9HB40 452 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 ADAMTS6Q9UKP5 1117 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 IGHV3-15A0A0B4J1V0 119 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF814B7Z6K7 855 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 NXPE3Q969Y0 559 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 BANF2Q9H503 90 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 PGAP2Q9UHJ9 254 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 MCM3APO60318 1980 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 C5orf49A4QMS7 147 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 HBE1P02100 147 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 GPR12P47775 334 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 ANKRD13BQ86YJ7 626 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 GDE1Q9NZC3 331 aa15.96■□□□□ 0.15
COL27A1-201ENST00000356083 TMEM235A6NFC5 223 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 IL2RAP01589 272 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 RING1Q06587 406 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 FAM69AQ5T7M9 428 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 BTLAQ7Z6A9 289 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 NOXA1Q86UR1 476 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 LRRC28Q86X40 367 aaPredicted RBP15.96■□□□□ 0.14
COL27A1-201ENST00000356083 IFI44Q8TCB0 444 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 MUL1Q969V5 352 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 EMC6Q9BV81 110 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 SLC22A7Q9Y694 548 aa15.96■□□□□ 0.14
COL27A1-201ENST00000356083 MROH6A6NGR9 719 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 GLYR1Q49A26 553 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 ARPC5LQ9BPX5 153 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CTDSP1Q9GZU7 261 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 FREM3P0C091 2139 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 TMEM82A0PJX8 343 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CBY3A6NI87 242 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 SDHDO14521 159 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 PDGFAP04085 211 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 PQLC3Q8N755 202 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 GDPD1Q8N9F7 314 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 FUBP1Q96AE4 644 aaKnown RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 BLACEA4D250 179 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 PRKACBP22694 351 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 DPPA2Q7Z7J5 298 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 TGIF2LYQ8IUE0 185 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 OR52H1Q8NGJ2 320 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 MRPS24Q96EL2 167 aaKnown RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 ZNF576Q9H609 170 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CYTIPO60759 359 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 UTS2O95399 124 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 KCNAB1Q14722 419 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 MEPCEQ7L2J0 689 aaKnown RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 OR13J1Q8NGT2 312 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 PPLO60437 1756 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 WNT7BP56706 349 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 SLC10A2Q12908 348 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 PRSS48Q7RTY5 328 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 VASH2Q86V25 355 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 SLC35F3Q8IY50 421 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 TCTE3Q8IZS6 198 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 ELP4Q96EB1 424 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 RSRP1Q9BUV0 290 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 OR52D1Q9H346 318 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CICQ96RK0 1608 aaPredicted RBP15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CPMP14384 443 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 CTBSQ01459 385 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 MENTQ9BUN1 341 aa15.95■□□□□ 0.14
COL27A1-201ENST00000356083 LOC102723971A0A1B0GUV8 181 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 PCGF2P35227 344 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 PPIAP62937 165 aaKnown RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 MINDY1Q8N5J2 469 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 C1QTNF2Q9BXJ5 285 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 TMPRSS5Q9H3S3 457 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 VIRMAQ69YN4 1812 aaKnown RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 NCOR1O75376 2440 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 GUSBP08236 651 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 EN2P19622 333 aaPredicted RBP15.94■□□□□ 0.14
COL27A1-201ENST00000356083 ASB17Q8WXJ9 295 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 PELI2Q9HAT8 420 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 AIG1Q9NVV5 245 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 SIX4Q9UIU6 781 aa15.94■□□□□ 0.14
COL27A1-201ENST00000356083 OSGIN1Q9UJX0 560 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms