RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 MED25Q71SY5 747 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 KLHDC8BQ8IXV7 354 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR13F1Q8NGS4 319 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ZNRF4Q8WWF5 429 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 UTP4Q969X6 686 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 TM7SF3Q9NS93 570 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 FBXL4Q9UKA2 621 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 CICQ96RK0 1608 aaPredicted RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 C4orf47A7E2U8 309 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 ATP1B1P05026 303 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SLC10A3P09131 477 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SRMP19623 302 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 KIAA0141Q14154 515 aaPredicted RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 GLYATL3Q5SZD4 288 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 OR8G2PQ6IF36 304 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 PHYHIPQ92561 330 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
LMX1B-201ENST00000355497 REEP6Q96HR9 211 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 SLAMF7Q9NQ25 335 aa13.74□□□□□ -0.21
LMX1B-201ENST00000355497 KAT6AQ92794 2004 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 GJB3O75712 270 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ATXN1LP0C7T5 689 aaKnown RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ELLP55199 621 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ZMAT1Q5H9K5 638 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 RTL10Q7L3V2 364 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SLC39A11Q8N1S5 342 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 C14orf79Q96F83 325 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SLC25A21Q9BQT8 299 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 KPTNQ9Y664 436 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 TRDV1A0A1B0GX56 115 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SLC16A6O15403 523 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 XRCC3O43542 346 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 PDGFAP04085 211 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 FURINP09958 794 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SUB1P53999 127 aaKnown RBP eCLIP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 EPHA5P54756 1037 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 RRADP55042 308 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SLC35A2P78381 396 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 H2BFWTQ7Z2G1 175 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SEMA6DQ8NFY4 1073 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ARRDC2Q8TBH0 407 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SFT2D1Q8WV19 159 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 DCLRE1CQ96SD1 692 aaKnown RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 BARHL1Q9BZE3 327 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 GOLT1BQ9Y3E0 138 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 BCAT2O15382 392 aaPredicted RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 LALBAP00709 142 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF813Q6ZN06 617 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 AGBL5Q8NDL9 886 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 BOD1Q96IK1 185 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 SEC22CQ9BRL7 303 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 FAM103A1Q9BTL3 118 aaKnown RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 TAS2R5Q9NYW4 299 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 PHRF1Q9P1Y6 1649 aaKnown RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 A0A1B0GWA3 101 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 FPR3P25089 353 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 EIF1P41567 113 aaKnown RBP13.73□□□□□ -0.21
LMX1B-201ENST00000355497 CRMP1Q14194 572 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF626Q68DY1 528 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 Q6ZRG5 221 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 PRSS35Q8N3Z0 413 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 UGT2A1Q9Y4X1 527 aa13.73□□□□□ -0.21
LMX1B-201ENST00000355497 TRABD2BA6NFA1 517 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 DEGS1O15121 323 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 CNIH1O95406 144 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 TPMTP51580 245 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 CD276Q5ZPR3 534 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 KCTD11Q693B1 232 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 ARFGAP1Q8N6T3 406 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PLPP7Q8NBV4 271 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 KCNJ15Q99712 375 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 C20orf24Q9BUV8 137 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 MED9Q9NWA0 146 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 MRPL22Q9NWU5 206 aaKnown RBP13.72□□□□□ -0.21
LMX1B-201ENST00000355497 CCR9P51686 369 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 MAP2K6P52564 334 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 YPEL5P62699 121 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 KDM4DQ6B0I6 523 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 ZNF425Q6IV72 752 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 TMEM182Q6ZP80 229 aaPredicted RBP13.72□□□□□ -0.21
LMX1B-201ENST00000355497 UQCC2Q9BRT2 126 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 TWSG1Q9GZX9 223 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PDLIM7Q9NR12 457 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 CORINQ9Y5Q5 1042 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 URGCP-MRPS24S4R325 110 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SIX6O95475 246 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 DTYMKP23919 212 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 OR10J5Q8NHC4 309 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 OR5M11Q96RB7 305 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 OR6C1Q96RD1 312 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SLC46A2Q9BY10 475 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 PRSS16Q9NQE7 514 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SERTM2A0A1B0GWG4 89 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 LGALS8O00214 317 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 SELENOFO60613 162 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 GCAP28676 217 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 CSN1S1P47710 185 aa13.72□□□□□ -0.21
LMX1B-201ENST00000355497 GDPD3Q7L5L3 318 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms