RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 PGA3P0DJD8 388 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 CPN1P15169 458 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 CTLA4P16410 223 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 PSMB9P28065 219 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 GP2P55259 537 aaKnown RBP13.89□□□□□ -0.19
CTSA-202ENST00000354880 CAMK2DQ13557 499 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 MED22Q15528 200 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 INAQ16352 499 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 SYT6Q5T7P8 510 aaPredicted RBP13.89□□□□□ -0.19
CTSA-202ENST00000354880 LHFPL3Q86UP9 236 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 OR13F1Q8NGS4 319 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 ZCCHC14Q8WYQ9 949 aaKnown RBP13.89□□□□□ -0.19
CTSA-202ENST00000354880 WDYHV1Q96HA8 205 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 ZNF385AQ96PM9 386 aaKnown RBP13.89□□□□□ -0.19
CTSA-202ENST00000354880 RBP7Q96R05 134 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 MCTS1Q9ULC4 181 aaKnown RBP13.89□□□□□ -0.19
CTSA-202ENST00000354880 LHX6Q9UPM6 363 aa13.89□□□□□ -0.19
CTSA-202ENST00000354880 IGLV1-36A0A0B4J1U3 117 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 A0A1B0GVC2 190 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 TMEM129A0AVI4 362 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 ZNF716A6NP11 495 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 C12orf71A8MTZ7 269 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 SEC14L2O76054 403 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 SYNGR4O95473 234 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 NAA10P41227 235 aaPredicted RBP13.88□□□□□ -0.19
CTSA-202ENST00000354880 CLRN1P58418 232 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 C3AR1Q16581 482 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 PLEKHN1Q494U1 663 aaPredicted RBP13.88□□□□□ -0.19
CTSA-202ENST00000354880 DNM1P34Q6PK57 102 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 LYPD4Q6UWN0 246 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 ZNF367Q7RTV3 350 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 SIAH3Q8IW03 269 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 NOXO1Q8NFA2 376 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 OR10H4Q8NGA5 316 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 TBX5Q99593 518 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 RACGAP1Q9H0H5 632 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 INPP5EQ9NRR6 644 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 ERVK13-1Q9NX77 482 aa13.88□□□□□ -0.19
CTSA-202ENST00000354880 CENPAP49450 140 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ACTC1P68032 377 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ACTA1P68133 377 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 FMODQ06828 376 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 RASGEF1BQ0VAM2 473 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ETFDHQ16134 617 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 THEM4Q5T1C6 240 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 CHMP1BQ7LBR1 199 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ZIC4Q8N9L1 334 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ZNF511Q8NB15 262 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 OR5M11Q96RB7 305 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ZNF649Q9BS31 505 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 FAM192AQ9GZU8 254 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 PLSCR2Q9NRY7 297 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 CAMK2AQ9UQM7 478 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 LSM2Q9Y333 95 aaKnown RBP13.87□□□□□ -0.19
CTSA-202ENST00000354880 FLVCR1Q9Y5Y0 555 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 MED19A0JLT2 244 aaPredicted RBP13.87□□□□□ -0.19
CTSA-202ENST00000354880 DAPL1A0PJW8 107 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 CENPBD1B2RD01 187 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 AQP7O14520 342 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 AKAP8O43823 692 aaKnown RBP13.87□□□□□ -0.19
CTSA-202ENST00000354880 SELENOFO60613 162 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 TFP02787 698 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 BLVRAP53004 296 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 GLO1Q04760 184 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 SPHARQ15513 63 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 TIGD6Q17RP2 521 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 FOXB2Q5VYV0 432 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 CARD17Q5XLA6 110 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ERI1Q8IV48 349 aaKnown RBP13.87□□□□□ -0.19
CTSA-202ENST00000354880 FNDC8Q8TC99 324 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 ABHD3Q8WU67 409 aa13.87□□□□□ -0.19
CTSA-202ENST00000354880 SMAP2Q8WU79 429 aaPredicted RBP13.87□□□□□ -0.19
CTSA-202ENST00000354880 MAP1BP46821 2468 aaKnown RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 TVP23AA6NH52 213 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 H3BSA7 217 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 WISP2O76076 250 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 ZNF432O94892 652 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 HLA-DQA2P01906 255 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 CRYABP02511 175 aaKnown RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 OR2T7P0C7T2 308 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 WNT4P56705 351 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 HIST3H3Q16695 136 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 OR2G6Q5TZ20 316 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 SLC35F2Q8IXU6 374 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 TIGD4Q8IY51 512 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 KLHL36Q8N4N3 616 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 OR2T27Q8NH04 317 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 FNDC9Q8TBE3 224 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 RNF128Q8TEB7 428 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 ZNF775Q96BV0 537 aaPredicted RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 NMD3Q96D46 503 aaKnown RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 COG8Q96MW5 612 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 OR2M2Q96R28 347 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 PRRG4Q9BZD6 226 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 PRDM14Q9GZV8 571 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 RBM38Q9H0Z9 239 aaKnown RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 MARCH7Q9H992 704 aa13.86□□□□□ -0.19
CTSA-202ENST00000354880 ZNF71Q9NQZ8 489 aaPredicted RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 COA3Q9Y2R0 106 aaPredicted RBP13.86□□□□□ -0.19
CTSA-202ENST00000354880 IGKV1D-43A0A0B4J1Z2 117 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms