RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 OR51V1Q9H2C8 321 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 KALRNO60229 2985 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CCDC182A6NF36 153 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 SLC43A1O75387 559 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CCDC159P0C7I6 412 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 EDNRAP25101 427 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 HTR1FP30939 366 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 TIMP3P35625 211 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CSNK1A1P48729 337 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 ZNF133P52736 654 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CHN2P52757 468 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CDH11P55287 796 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 CSNK2BP67870 215 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 PHYHD1Q5SRE7 291 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 LRFN4Q6PJG9 635 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 C3P1Q6ZMU1 363 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 NUFIP2Q7Z417 695 aaKnown RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 GCNT2Q8N0V5 402 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 BPIFB6Q8NFQ5 453 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 RBP7Q96R05 134 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 NR1H4Q96RI1 486 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 TTYH2Q9BSA4 534 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 AMBNQ9NP70 447 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 GLTPQ9NZD2 209 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 H2AFY2Q9P0M6 372 aaPredicted RBP23.96■■□□□ 1.43
SSBP4-202ENST00000348495 B9D1Q9UPM9 204 aa23.96■■□□□ 1.43
SSBP4-202ENST00000348495 KMT2BQ9UMN6 2715 aaPredicted RBP23.95■■□□□ 1.42
SSBP4-202ENST00000348495 IGLV1-36A0A0B4J1U3 117 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 IGKV1D-43A0A0B4J1Z2 117 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 XPNPEP2O43895 674 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 APOFQ13790 326 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 RBM48Q5RL73 367 aaKnown RBP23.95■■□□□ 1.42
SSBP4-202ENST00000348495 LINC01590Q5TEZ4 76 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 FAM214BQ7L5A3 538 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 TEAD3Q99594 435 aa23.95■■□□□ 1.42
SSBP4-202ENST00000348495 YTHDF1Q9BYJ9 559 aaKnown RBP23.95■■□□□ 1.42
SSBP4-202ENST00000348495 SRA1Q9HD15 236 aaKnown RBP23.95■■□□□ 1.42
SSBP4-202ENST00000348495 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.95■■□□□ 1.421e-6■■■■□ 19.8
SSBP4-202ENST00000348495 COL6A6A6NMZ7 2263 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 SLC16A7O60669 478 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 GLI4P10075 376 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 CRHBPP24387 322 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 CRABP1P29762 137 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 ZNF91Q05481 1191 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 LGALS3BPQ08380 585 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 KLHL12Q53G59 568 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 SLC35D3Q5M8T2 416 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 SLC25A47Q6Q0C1 308 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 MCHR2Q969V1 340 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 ZFP3Q96NJ6 502 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 RACGAP1Q9H0H5 632 aa23.94■■□□□ 1.42
SSBP4-202ENST00000348495 RP1L1Q8IWN7 2480 aaPredicted RBP23.94■■□□□ 1.42
SSBP4-202ENST00000348495 SNTNA6NMZ2 147 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 DBTP11182 482 aaKnown RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 NR2C1P13056 603 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 CEACAM8P31997 349 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 PYCR1P32322 319 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 KIR2DL2P43627 348 aaPredicted RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 SLC15A1P46059 708 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 TMED1Q13445 227 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 OR51L1Q8NGJ5 315 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 OR6N1Q8NGY5 312 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 WARS2Q9UGM6 360 aaKnown RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 MOKQ9UQ07 419 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 RPL36Q9Y3U8 105 aaKnown RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 ZFYVE26Q68DK2 2539 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 POLEQ07864 2286 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 SLC22A31A6NKX4 558 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 UPK3AO75631 287 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 SMNDC1O75940 238 aaKnown RBP eCLIP23.93■■□□□ 1.425e-7■■■■■ 29.1
SSBP4-202ENST00000348495 GLCEO94923 617 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 QDPRP09417 244 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 FOXF2Q12947 444 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 ETFDHQ16134 617 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 B3GLCTQ6Y288 498 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 PROKR2Q8NFJ6 384 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 APH1AQ96BI3 265 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 RHNO1Q9BSD3 238 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 LINC00470Q9BZP3 86 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 SLCO5A1Q9H2Y9 848 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 MRPS18AQ9NVS2 196 aaKnown RBP23.93■■□□□ 1.42
SSBP4-202ENST00000348495 FKBP14Q9NWM8 211 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 HAO2Q9NYQ3 351 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 PSORS1C1Q9UIG5 152 aa23.93■■□□□ 1.42
SSBP4-202ENST00000348495 CRHP06850 196 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 EIF2S3LQ2VIR3 472 aaKnown RBP23.92■■□□□ 1.42
SSBP4-202ENST00000348495 C10orf128Q5T292 105 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 RIPPLY2Q5TAB7 128 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 DNM1P34Q6PK57 102 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 ZC3HAV1Q7Z2W4 902 aaKnown RBP23.92■■□□□ 1.42
SSBP4-202ENST00000348495 MYRFQ9Y2G1 1151 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 EMC9Q9Y3B6 208 aa23.92■■□□□ 1.42
SSBP4-202ENST00000348495 TRIM64A6NGJ6 449 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 OR6C65A6NJZ3 312 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 FAM171A2A8MVW0 826 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 FAM20BO75063 409 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 TNFSF13O75888 250 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 GSTT1P30711 240 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 MTNR1AP48039 350 aa23.91■■□□□ 1.42
SSBP4-202ENST00000348495 TSPO2Q5TGU0 170 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms