RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 DUSP15Q9H1R2 295 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 ATXN7L1Q9ULK2 861 aaPredicted RBP13.93□□□□□ -0.18
UPF3B-202ENST00000345865 RCE1Q9Y256 329 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 COL6A3P12111 3177 aa13.93□□□□□ -0.18
UPF3B-202ENST00000345865 TRBV5-7A0A0A0MS05 114 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF593O00488 134 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF780AO75290 641 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF254O75437 659 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 DXOO77932 396 aaKnown RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 WNT11O96014 354 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 MAS1P04201 325 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 HLA-DOBP13765 273 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 CTLA4P16410 223 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 RNF4P78317 190 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 BTBD16Q32M84 506 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 WDR38Q5JTN6 314 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 C1orf140Q5VVS0 124 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 SFRP4Q6FHJ7 346 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 PLCZ1Q86YW0 608 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF676Q8N7Q3 588 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 STT3BQ8TCJ2 826 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 THAP3Q8WTV1 239 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TMEM106AQ96A25 262 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 C4orf45Q96LM5 186 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TRAF4Q9BUZ4 470 aaPredicted RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 OR51J1Q9H342 316 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF768Q9H5H4 540 aaKnown RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 BEX1Q9HBH7 125 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 EXPH5Q8NEV8 1989 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TRIOBPQ9H2D6 2365 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 IGLV1-36A0A0B4J1U3 117 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 A0A1B0GTQ1 180 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 XKRYO14609 159 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 SLC16A7O60669 478 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TIAF1O95411 115 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 PNPP00491 289 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 MT-ATP6P00846 226 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 HLA-DQA2P01906 255 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 CSRP1P21291 193 aaKnown RBP13.92□□□□□ -0.18
UPF3B-202ENST00000345865 CDK2P24941 298 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 CCR9P51686 369 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 GALK2Q01415 458 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 MELKQ14680 651 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 MEP1BQ16820 701 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ST3GAL2Q16842 350 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 BTN2A1Q7KYR7 527 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TMPRSS12Q86WS5 348 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 WDFY1Q8IWB7 410 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 SPEM1Q8N4L4 309 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 APCDD1LQ8NCL9 501 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 DEDD2Q8WXF8 326 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 ELOVL3Q9HB03 270 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 PLEKHA1Q9HB21 404 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 HRASLSQ9HDD0 168 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 TAS2R10Q9NYW0 307 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 FLVCR2Q9UPI3 526 aa13.92□□□□□ -0.18
UPF3B-202ENST00000345865 OR6C76A6NM76 312 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 A8MVM7 634 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 GABARAPH6UMI1 98 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 PLPP3O14495 311 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 H2AFB2P0C5Z0 115 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 STOMP27105 288 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 COL28A1Q2UY09 1125 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 SLC22A10Q63ZE4 541 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 GRINAQ7Z429 371 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF417Q8TAU3 575 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 GIMAP1Q8WWP7 306 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 PHF21AQ96BD5 680 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 HAVCR1Q96D42 359 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 ZNF587Q96SQ5 575 aaPredicted RBP13.91□□□□□ -0.18
UPF3B-202ENST00000345865 MNTQ99583 582 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 C7orf50Q9BRJ6 194 aaKnown RBP13.91□□□□□ -0.18
UPF3B-202ENST00000345865 GON7Q9BXV9 100 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 TXNIPQ9H3M7 391 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 COPZ2Q9P299 210 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 HSPB11Q9Y547 144 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 FKBP7Q9Y680 259 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 TMEM14AQ9Y6G1 99 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 TMEM212A6NML5 194 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 RAD1O60671 282 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 CALCBP10092 127 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 MAPK3P27361 379 aaPredicted RBP13.91□□□□□ -0.18
UPF3B-202ENST00000345865 CENPAP49450 140 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 FBXW4P57775 412 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 ASPHD2Q6ICH7 369 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 MDGA2Q7Z553 956 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 GLB1L2Q8IW92 636 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 OR11G2Q8NGC1 345 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 MCHR2Q969V1 340 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 MIB2Q96AX9 1013 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 OR8B4Q96RC9 309 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 NDEL1Q9GZM8 345 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 ZFP64Q9NPA5 681 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 NKIRAS2Q9NYR9 191 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 VSX1Q9NZR4 365 aaPredicted RBP13.91□□□□□ -0.18
UPF3B-202ENST00000345865 SLC22A13Q9Y226 551 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 HRH3Q9Y5N1 445 aa13.91□□□□□ -0.18
UPF3B-202ENST00000345865 SLC22A23A1A5C7 686 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms