RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 MCATQ8IVS2 390 aaKnown RBP12.62□□□□□ -0.39
TRIO-202ENST00000344204 TP53INP2Q8IXH6 220 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 FAM26EQ8N5C1 309 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 OR8U1Q8NH10 309 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 B3GAT2Q9NPZ5 323 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 RAB27BO00194 218 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 FCGR2CP31995 323 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 PJVKQ0ZLH3 352 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 GGTA1PQ4G0N0 100 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 NEURL3Q96EH8 262 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 CCNL2Q96S94 520 aaPredicted RBP12.62□□□□□ -0.39
TRIO-202ENST00000344204 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 MFSD2BA6NFX1 497 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 A6NLC8 198 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 K7ERQ8 282 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 FXYD1O00168 92 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 CTSLP07711 333 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 KCNJ3P48549 501 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 OR8G1Q15617 311 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 XKR7Q5GH72 579 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 CMTM4Q8IZR5 234 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 IL17BQ9UHF5 180 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 KRTDAPP60985 99 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 UBXN2BQ14CS0 331 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 TMEM182Q6ZP80 229 aaPredicted RBP12.62□□□□□ -0.39
TRIO-202ENST00000344204 SLC12A9Q9BXP2 914 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 SEC11CQ9BY50 192 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 DMRT1Q9Y5R6 373 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 SBF2Q86WG5 1849 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 CSF2RAP15509 400 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 KITLGP21583 273 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 WDR88Q6ZMY6 472 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 DUSP18Q8NEJ0 188 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 C1orf226A1L170 272 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 TRAF3IP2O43734 574 aaPredicted RBP12.62□□□□□ -0.39
TRIO-202ENST00000344204 SOD1P00441 154 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 PNMTP11086 282 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 EPHA2P29317 976 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 LGALSLQ3ZCW2 172 aaPredicted RBP12.62□□□□□ -0.39
TRIO-202ENST00000344204 UHRF2Q96PU4 802 aa12.62□□□□□ -0.39
TRIO-202ENST00000344204 TK1P04183 234 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 OR5AP2Q8NGF4 316 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TMEM106AQ96A25 262 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 KCNIP2Q9NS61 270 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 CACNG4Q9UBN1 327 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 RAB22AQ9UL26 194 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 OR4E1P0C645 316 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 FAM210BQ96KR6 192 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 A0A1W2PPV4 95 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 PLGP00747 810 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 ZNF8P17098 575 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 ZNF528Q3MIS6 628 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TIGD5Q53EQ6 642 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 ENTPD8Q5MY95 495 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 ANKRD9Q96BM1 317 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 SENP5Q96HI0 755 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 METTL9Q9H1A3 318 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 KCNK6Q9Y257 313 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 XRCC3O43542 346 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 EMP2P54851 167 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 UBTD2Q8WUN7 234 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TMEM174Q8WUU8 243 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TSLPQ969D9 159 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3DA0A087WVF3 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3IA0A087WXS9 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3EA0A087X179 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3KA0A087X1G2 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3FA6NER0 549 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3LB9A6J9 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 H0Y8G0 127 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3HP0C7X1 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 COX20Q5RI15 118 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3GQ6DHY5 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3CQ6IPX1 549 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 ESPNLQ6ZVH7 1005 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TBC1D3Q8IZP1 549 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 MS4A10Q96PG2 267 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 CERS4Q9HA82 394 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 UQCC1Q9NVA1 299 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 A0A087WV62 115 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 NTF3P20783 257 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 BRICD5Q6PL45 260 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 GSN-AS1Q9NRJ2 163 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 C5AR2Q9P296 337 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 IL36AQ9UHA7 158 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 TNRC6CQ9HCJ0 1690 aaKnown RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 A0A1B0GV90 55 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 GALTP07902 379 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
TRIO-202ENST00000344204 NLGN4XQ8N0W4 816 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 GALNT16Q8N428 558 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 LKAAEAR1Q8TD35 194 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 HHATLQ9HCP6 504 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 CCL23P55773 120 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 DUSP28Q4G0W2 176 aa12.61□□□□□ -0.39
TRIO-202ENST00000344204 OR4C16Q8NGL9 310 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms