RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 SCAMP1O15126 338 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC2A10O95528 541 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 HLA-DQB1P01920 261 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 HHEXQ03014 270 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 RIN1Q13671 783 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 C2orf76Q3KRA6 126 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 EXOSC6Q5RKV6 272 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 C7orf61Q8IZ16 206 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DCBLD2Q96PD2 775 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 UBL7Q96S82 380 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 CLSTN3Q9BQT9 956 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PLEKHA2Q9HB19 425 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC2A4RGQ9NR83 387 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 MPIG6BO95866 241 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 CD3DP04234 171 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 TYRP1P17643 537 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DPTQ07507 201 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 KLHDC9Q8NEP7 349 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DPF3Q92784 378 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DERL3Q96Q80 235 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PARPBPQ9NWS1 579 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 REV1Q9UBZ9 1251 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 KCND3Q9UK17 655 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC16A7O60669 478 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 F11P03951 625 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 CST5P28325 142 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 HOXA1P49639 335 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ACY1Q03154 408 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC22A6Q4U2R8 563 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 GPR157Q5UAW9 335 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 C19orf12Q9NSK7 152 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 KLHL13Q9P2N7 655 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 EMC9Q9Y3B6 208 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PLEKHM1Q9Y4G2 1056 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PCYT1BQ9Y5K3 369 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NPIPA5A0A0B4J1W7 369 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NPIPA7E9PJI5 369 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PLA2G10O15496 165 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NSA2O95478 260 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NPIPA8P0DM63 369 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SULT1A3P0DMM9 295 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SULT1A4P0DMN0 295 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 MEOX2P50222 304 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 MAP2K6P52564 334 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ARF3P61204 181 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ARF1P84077 181 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NSDHLQ15738 373 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NLGN4YQ8NFZ3 816 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 NINJ1Q92982 152 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZCCHC4Q9H5U6 513 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PUS1Q9Y606 427 aaKnown RBP eCLIP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZC3H12DA2A288 527 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PRICKLE3O43900 615 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 RNGTTO60942 597 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 OR8G3PP0DMU2 310 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF44P15621 663 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PGFP49763 221 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DIO1P49895 249 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 OR5M10Q6IEU7 315 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 DND1Q8IYX4 353 aaKnown RBP4.4□□□□□ -1.71
CSMD3-203ENST00000343508 GABRG1Q8N1C3 465 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 C15orf54Q8N8G6 183 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLC16A11Q8NCK7 471 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 PLPP5Q8NEB5 264 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 OR52B4Q8NGK2 314 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SLAMF9Q96A28 289 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 AP1S3Q96PC3 154 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 APOOQ9BUR5 198 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 ZDHHC5Q9C0B5 715 aa4.4□□□□□ -1.71
CSMD3-203ENST00000343508 SUSD5O60279 629 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 HTR3BO95264 441 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MT-ATP6P00846 226 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 CLUP10909 449 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PPA1Q15181 289 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 COX15Q7KZN9 410 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF683Q8IZ20 524 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FAM213BQ8TBF2 198 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PLA2G12AQ9BZM1 189 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 LYRM4Q9HD34 91 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 STRAPQ9Y3F4 350 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A1W2PP55 124 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ZNF705GA8MUZ8 300 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 PYCARD-AS1I3L0S3 204 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MT-CO2P00403 227 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 HOXC12P31275 282 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 MEP1BQ16820 701 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ADAM5Q6NVV9 412 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 OR5M1Q8NGP8 315 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 CD99L2Q8TCZ2 262 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 FBXW5Q969U6 566 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 GOLGA4Q13439 2230 aaKnown RBP4.39□□□□□ -1.71
CSMD3-203ENST00000343508 A0A087WV62 115 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 C17orf105B2RV13 164 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 ABLIM3O94929 683 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 F10P00742 488 aa4.39□□□□□ -1.71
CSMD3-203ENST00000343508 HEXBP07686 556 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms