RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 ST6GALNAC5Q9BVH7 336 aa7.09□□□□□ -1.27
ATP2B4-201ENST00000341360 EHFQ9NZC4 300 aa7.09□□□□□ -1.27
ATP2B4-201ENST00000341360 A0A1W2PS29 197 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 PRRT4C9JH25 899 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 TAPBPO15533 448 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 CBR3O75828 277 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 TFP02787 698 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 PTGER4P35408 488 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 GABRA2P47869 451 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 CLN3Q13286 438 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 IKZF1Q13422 519 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 PEA15Q15121 130 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 CTU2Q2VPK5 515 aaKnown RBP7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 LILRA6Q6PI73 481 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 B3GNT8Q7Z7M8 397 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 NAXDQ8IW45 347 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 PRSS35Q8N3Z0 413 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 DCUN1D4Q92564 292 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 ANKRD9Q96BM1 317 aaPredicted RBP7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 GON7Q9BXV9 100 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 MBNL1Q9NR56 388 aaKnown RBP7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 WSB2Q9NYS7 404 aaPredicted RBP7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 VSX1Q9NZR4 365 aaPredicted RBP7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 LRFN1Q9P244 771 aa7.09□□□□□ -1.28
ATP2B4-201ENST00000341360 TMEM72A0PK05 275 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TMEM202A6NGA9 273 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 FAM171A2A8MVW0 826 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GABARAPH6UMI1 98 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 RFXAPO00287 272 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 PRAMEF4O60810 478 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 LY86O95711 162 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 F13BP05160 661 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CYC1P08574 325 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 SERPINA2P20848 420 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ISL1P61371 349 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 RPS27AP62979 156 aaKnown RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 UBA52P62987 128 aaKnown RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ERV3-1Q14264 604 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TOMM34Q15785 309 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TMEM196Q5HYL7 178 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 DESI1Q6ICB0 168 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 C8orf82Q6P1X6 216 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 SMIM15Q7Z3B0 74 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 FAM109AQ8N4B1 249 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 WFDC5Q8TCV5 224 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 NPRL2Q8WTW4 380 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TMEM106AQ96A25 262 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 OXGR1Q96P68 337 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 SDF2Q99470 211 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 MACROD1Q9BQ69 325 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ABHD6Q9BV23 337 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 NMNAT2Q9BZQ4 307 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 NXF5Q9H1B4 397 aaKnown RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CALHM2Q9HA72 323 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GPATCH2Q9NW75 528 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CXXC1Q9P0U4 656 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 OR52A1Q9UKL2 312 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 STMND1H3BQB6 276 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 FXYD1O00168 92 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ATF4P18848 351 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TBPP20226 339 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ARNTP27540 789 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CASP3P42574 277 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GALEQ14376 348 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GK2Q14410 553 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 MFFQ9GZY8 342 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GABARAPL1Q9H0R8 117 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 UBQLN3Q9H347 655 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 PLEKHF2Q9H8W4 249 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 LAMP3Q9UQV4 416 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CROCCQ5TZA2 2017 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 A0A0A6YYH2 397 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TRBV4-1A0A0J9YWV2 114 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 A6NJ64 397 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 PPP6CO00743 305 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 MSTNO14793 375 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 DOK2O60496 412 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CALCBP10092 127 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CD82P27701 267 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 DDOSTP39656 456 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 PSMB10P40306 273 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 SLC14A1Q13336 389 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 CRMP1Q14194 572 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 TMEM211Q6ICI0 200 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 FAM180BQ6P0A1 224 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 BRICD5Q6PL45 260 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 LSRQ86X29 649 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ZNF740Q8NDX6 193 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 SEMA6DQ8NFY4 1073 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 OR7G2Q8NG99 324 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 OR13C9Q8NGT0 318 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 ZNF582Q96NG8 517 aaPredicted RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 OR14A2Q96R54 314 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 DUSP21Q9H596 190 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 KCNJ16Q9NPI9 418 aa7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 LSM5Q9Y4Y9 91 aaKnown RBP7.08□□□□□ -1.28
ATP2B4-201ENST00000341360 GOSR2O14653 212 aa7.07□□□□□ -1.28
ATP2B4-201ENST00000341360 SHOXO15266 292 aa7.07□□□□□ -1.28
ATP2B4-201ENST00000341360 IFNA17P01571 189 aa7.07□□□□□ -1.28
ATP2B4-201ENST00000341360 OR8G3PP0DMU2 310 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms