RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 SHBQ15464 509 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 YIF1BQ5BJH7 314 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 TMEM255AQ5JRV8 349 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 PWWP2BQ6NUJ5 590 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 FAM199XQ6PEV8 388 aaPredicted RBP9.33□□□□□ -0.92
LIMA1-201ENST00000341247 LINC00346Q8IVM7 164 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 SEMA4CQ9C0C4 833 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 MED29Q9NX70 200 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 OR5V1Q9UGF6 321 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 HSPB11Q9Y547 144 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 HRH3Q9Y5N1 445 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 TRBV11-1A0A0K0K1C0 115 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 KHDRBS3O75525 346 aaKnown RBP9.33□□□□□ -0.92
LIMA1-201ENST00000341247 AHSA1O95433 338 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 P2RX1P51575 399 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 INSM1Q01101 510 aaPredicted RBP9.33□□□□□ -0.92
LIMA1-201ENST00000341247 WDR45BQ5MNZ6 344 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 FAM69AQ5T7M9 428 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 EEF1A1P5Q5VTE0 462 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 GLB1L2Q8IW92 636 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 PRSS35Q8N3Z0 413 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 CREB3L1Q96BA8 519 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 EMC6Q9BV81 110 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 B9D1Q9UPM9 204 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 MOKQ9UQ07 419 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 COA3Q9Y2R0 106 aaPredicted RBP9.33□□□□□ -0.92
LIMA1-201ENST00000341247 AIPO00170 330 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 FABP7O15540 132 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 ABHD16AO95870 558 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 DHFRP00374 187 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 CAPZA2P47755 286 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 POLR2HP52434 150 aaKnown RBP9.33□□□□□ -0.92
LIMA1-201ENST00000341247 DCAF7P61962 342 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 CCL7P80098 99 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 GPLD1P80108 840 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 FOXK1P85037 733 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 FAPQ12884 760 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 NKAIN1Q4KMZ8 207 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 WDR38Q5JTN6 314 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 UBE2NLQ5JXB2 153 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 TMEM69Q5SWH9 247 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 LCN10Q6JVE6 187 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 CORO6Q6QEF8 472 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 UNQ9370/PRO34162Q6UXP9 181 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 SHDQ96IW2 340 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 SLITRK2Q9H156 845 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 KLRF1Q9NZS2 232 aa9.33□□□□□ -0.92
LIMA1-201ENST00000341247 PRSS37A4D1T9 235 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 SCRG1O75711 98 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PNPP00491 289 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 TRAPPC2P0DI81 140 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 TRAPPC2BP0DI82 140 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 CXCL3P19876 107 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 CDK2P24941 298 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PNLIPRP2P54317 469 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 STARD6P59095 220 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 RPL27P61353 136 aaKnown RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 HSF2Q03933 536 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 ISXQ2M1V0 245 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 YOD1Q5VVQ6 348 aaPredicted RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PAPD4Q6PIY7 484 aaKnown RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 WDFY1Q8IWB7 410 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 COMMD4Q9H0A8 199 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 OR10A4Q9H209 315 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 CHRDQ9H2X0 955 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 CAMK2AQ9UQM7 478 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 A0A1W2PQM1 296 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 FAM172BPA6NC97 362 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 OR4C45A6NMZ5 311 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PDCD5O14737 125 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 FADS1O60427 444 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 DPP4P27487 766 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PITPNAQ00169 270 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 MAB21L1Q13394 359 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 BCL2A1Q16548 175 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PHF19Q5T6S3 580 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 OR51D1Q8NGF3 324 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 C5orf34Q96MH7 638 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 MRPL22Q9NWU5 206 aaKnown RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 SIT1Q9Y3P8 196 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 BDP1A6H8Y1 2624 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 A8MVM7 634 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 FAM47E-STBD1D6RA91 191 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 K7ESF4 209 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 SIGLEC6O43699 453 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 TOXO94900 526 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 CFIP05156 583 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 APEHP13798 732 aaKnown RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 KIR3DL2P43630 455 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 MMP15P51511 669 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 C19orf57Q0VDD7 668 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 EIF2B1Q14232 305 aaKnown RBP9.32□□□□□ -0.92
LIMA1-201ENST00000341247 GPR139Q6DWJ6 353 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 KRT77Q7Z794 578 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 PLPP7Q8NBV4 271 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 APCDD1LQ8NCL9 501 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 GRPEL2Q8TAA5 225 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 LIPHQ8WWY8 451 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 DNASE2BQ8WZ79 361 aa9.32□□□□□ -0.92
LIMA1-201ENST00000341247 FBXL3Q9UKT7 428 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms