RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 UPB1Q9UBR1 384 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 KLHDC2Q9Y2U9 406 aa12.9□□□□□ -0.34
PCDH8-201ENST00000338862 TBX19O60806 448 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 ICAM2P13598 275 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 C2orf76Q3KRA6 126 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 CBLN3Q6UW01 205 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 LRRTM1Q86UE6 522 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 TTC9Q92623 222 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 ZBTB8AQ96BR9 441 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 COX14Q96I36 57 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 PCDHGA9Q9Y5G4 932 aaKnown RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SDK2Q58EX2 2172 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 KLF8O95600 359 aaPredicted RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SFTPBP07988 381 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 IL13RA1P78552 427 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 AIMP2Q13155 320 aaKnown RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SLC9A3R2Q15599 337 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 HACD4Q5VWC8 232 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 OR52W1Q6IF63 320 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 CORO6Q6QEF8 472 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 TMPRSS11FQ6ZWK6 438 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 CRIPAKQ8N1N5 446 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 OR2L13Q8N349 312 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 GTPBP8Q8N3Z3 284 aaPredicted RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 TEX19Q8NA77 164 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 OR1J2Q8NGS2 313 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 STK35Q8TDR2 534 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 BADQ92934 168 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 RPP25Q9BUL9 199 aaKnown RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 EVA1AQ9H8M9 152 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 GPR31O00270 319 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 HTR3BO95264 441 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SCGB1D2O95969 90 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 S100A6P06703 90 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF823P16415 610 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SLC2A5P22732 501 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 EPHA4P54764 986 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 FZD5Q13467 585 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 ZIC1Q15915 447 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 FAM199XQ6PEV8 388 aaPredicted RBP12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SPPL3Q8TCT6 385 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 DCUN1D4Q92564 292 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 SLC22A7Q9Y694 548 aa12.89□□□□□ -0.35
PCDH8-201ENST00000338862 ASXL3Q9C0F0 2248 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 TRAV1-2A0A0B4J238 106 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 HOXD4P09016 255 aaPredicted RBP12.88□□□□□ -0.35
PCDH8-201ENST00000338862 RAB40ALP0C0E4 278 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 ARFRP1Q13795 201 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 C1QL3Q5VWW1 255 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 OR13C3Q8NGS6 347 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 RAB40AQ8WXH6 277 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 INTS14Q96SY0 518 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 TBL1XR1Q9BZK7 514 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 A0A0B4J2E0 115 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 A0A1B0GX12 115 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 GPRIN2O60269 458 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 ACSM1Q08AH1 577 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 LCN10Q6JVE6 187 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 TIMP4Q99727 224 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 SMIM3Q9BZL3 60 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 BRINP1O60477 761 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 FBXO24O75426 580 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 THBS1P07996 1170 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 GLI4P10075 376 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 C5AR1P21730 350 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 TACR3P29371 465 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 IL12BP29460 328 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 RBM39Q14498 530 aaKnown RBP12.88□□□□□ -0.35
PCDH8-201ENST00000338862 ETFDHQ16134 617 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 GLT8D1Q68CQ7 371 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 RSC1A1Q92681 617 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 MYADMQ96S97 322 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 NUDT22Q9BRQ3 303 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 TCEAL2Q9H3H9 227 aaPredicted RBP12.88□□□□□ -0.35
PCDH8-201ENST00000338862 FRRS1LQ9P0K9 344 aa12.88□□□□□ -0.35
PCDH8-201ENST00000338862 OR5H14A6NHG9 310 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 NDUFB6O95139 128 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 CSF1P09603 554 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 SLC2A1P11166 492 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ZP3P21754 424 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 OR1D4P47884 311 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 CCDC157Q569K6 752 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 PRAMEF8Q5VWM4 474 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 PRAMEF7Q5VXH5 474 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 MED25Q71SY5 747 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 TMEM17Q86X19 198 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 SPAG16Q8N0X2 631 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 NUDCD2Q8WVJ2 157 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 HAVCR1Q96D42 359 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 PITHD1Q9GZP4 211 aaPredicted RBP12.87□□□□□ -0.35
PCDH8-201ENST00000338862 DUSP22Q9NRW4 184 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 OPN4Q9UHM6 478 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 ZNF223Q9UK11 482 aaPredicted RBP12.87□□□□□ -0.35
PCDH8-201ENST00000338862 EDARQ9UNE0 448 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 EMC9Q9Y3B6 208 aa12.87□□□□□ -0.35
PCDH8-201ENST00000338862 METTL12A8MUP2 240 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms