RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 KCND3Q9UK17 655 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SELENOFO60613 162 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 CPZQ66K79 652 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 PM20D1Q6GTS8 502 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 B3GNT8Q7Z7M8 397 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 IFI44Q8TCB0 444 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SLC35E1Q96K37 410 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SLC29A1Q99808 456 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SLC35D1Q9NTN3 355 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 IL37Q9NZH6 218 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 HCFC2Q9Y5Z7 792 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 A0A0D9SG52 128 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 PPP6CO00743 305 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 PRAF2O60831 178 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF865P0CJ78 1059 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ACKR3P25106 362 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SUB1P53999 127 aaKnown RBP eCLIP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 OLIG3Q7RTU3 272 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 CNTN4Q8IWV2 1026 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 SVBPQ8N300 66 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 C11orf40Q8WZ69 217 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM230Q96A57 120 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 BIRC8Q96P09 236 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 WDR76Q9H967 626 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM235A6NFC5 223 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 LRRC28Q86X40 367 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF595Q8IYB9 648 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF576Q9H609 170 aa10.87□□□□□ -0.67
SHANK2-201ENST00000338508 CGGBP1Q9UFW8 167 aaPredicted RBP10.87□□□□□ -0.67
SHANK2-201ENST00000338508 OR5K3A6NET4 321 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM212A6NML5 194 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 C1SP09871 688 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 PCBP3P57721 371 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 TNFRSF17Q02223 184 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM182Q6ZP80 229 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OR52N5Q8NH56 324 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 WASH6PQ9NQA3 447 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 NECAP2Q9NVZ3 263 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OR52A1Q9UKL2 312 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 CCSO14618 274 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SHC1P29353 583 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 DLX5P56178 289 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 DOC2BQ14184 412 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 MRPL43Q8N983 215 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 IKZF5Q9H5V7 419 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 MED9Q9NWA0 146 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 C5orf49A4QMS7 147 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 G3V2L1 256 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 HPNP05981 417 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 CSF3P09919 207 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 KEAP1Q14145 624 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 VASH2Q86V25 355 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 KDF1Q8NAX2 398 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OR5K2Q8NHB8 316 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 KLF16Q9BXK1 252 aaPredicted RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 XRN1Q8IZH2 1706 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SCGB1C2P0DMR2 95 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 GJA4P35212 333 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 RAB38P57729 211 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 RAP2BP61225 183 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 RPS25P62851 125 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SMN1Q16637 294 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SPANXN5Q5MJ07 72 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM106AQ96A25 262 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SARGQ9BW04 601 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 CHST6Q9GZX3 395 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 FGF21Q9NSA1 209 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SLC23A1Q9UHI7 598 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF835Q9Y2P0 537 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 PDGFAP04085 211 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 METTL15P1P0C7V9 234 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 ACP2P11117 423 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SOX18P35713 384 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 RIPPLY1Q0D2K3 151 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 BCL7AQ4VC05 210 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 DMRTC1Q5HYR2 192 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OR10K2Q6IF99 312 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OR2M7Q8NG81 312 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 FBXO27Q8NI29 283 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 NIPSNAP3BQ9BS92 247 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 HAPLN2Q9GZV7 340 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 DNMT3BQ9UBC3 853 aaKnown RBP10.86□□□□□ -0.67
SHANK2-201ENST00000338508 HRH3Q9Y5N1 445 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 PIAS2O75928 621 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 HBE1P02100 147 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 OPRD1P41143 372 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 SLC5A12Q1EHB4 618 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 RFLNAQ6ZTI6 216 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 PARP16Q8N5Y8 322 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 ZNF384Q8TF68 577 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 TMEM255BQ8WV15 326 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 NAGKQ9UJ70 344 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 CCL26Q9Y258 94 aa10.86□□□□□ -0.67
SHANK2-201ENST00000338508 FAM221AA4D161 298 aa10.85□□□□□ -0.67
SHANK2-201ENST00000338508 SERINC4A6NH21 518 aa10.85□□□□□ -0.67
SHANK2-201ENST00000338508 OR7C2O60412 319 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms