RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 PIN1P1O15428 100 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 CNOT4O95628 575 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 IL11P20809 199 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 PMELP40967 661 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 FOLR3P41439 243 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 KIR3DL2P43630 455 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 RORCP51449 518 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 FBXW4P57775 412 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC17A1Q14916 467 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ELOA3BQ3SY89 546 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 SHFQ7M4L6 423 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 PRSS35Q8N3Z0 413 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 PARP16Q8N5Y8 322 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 LRRC17Q8N6Y2 441 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 FAM169BQ8N8A8 192 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 Q8N9G6 341 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ELOA3Q8NG57 546 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 NKD1Q969G9 470 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 C4orf45Q96LM5 186 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF75AQ96N20 296 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 SMAD5Q99717 465 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 SH3GL3Q99963 347 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ASPNQ9BXN1 380 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 PRDM14Q9GZV8 571 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 NIPAL2Q9H841 368 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ISG20L2Q9H9L3 353 aaKnown RBP4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 TBC1D24Q9ULP9 559 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 RPH3AQ9Y2J0 694 aaPredicted RBP4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 SEC16AO15027 2179 aa4.79□□□□□ -1.64
PRPF4B-201ENST00000337659 ARHGAP21Q5T5U3 1957 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 M0R129 80 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 TP53I11O14683 189 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CCL4P13236 92 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF708P17019 499 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 BMP7P18075 431 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SSR4P51571 173 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CLDN15P56746 228 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SIRPAP78324 504 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 RASGEF1BQ0VAM2 473 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 FOXF1Q12946 379 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NDUFAF6Q330K2 333 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 TMEM42Q69YG0 159 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC18B1Q6NT16 456 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 DPPA2Q7Z7J5 298 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 OR10S1Q8NGN2 331 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ADOQ96SZ5 270 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CRB3Q9BUF7 120 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CNPPD1Q9BV87 410 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 PPIL3Q9H2H8 161 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ARRDC1-AS1Q9H2J1 176 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 KCNN2Q9H2S1 579 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC39A1Q9NY26 324 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 KLHDC2Q9Y2U9 406 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 EP300Q09472 2414 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 A0A0U1RQV5 110 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 TNNI3P19429 210 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SOX3P41225 446 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 RANBP1P43487 201 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 RPS5P46782 204 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ENTPD1P49961 510 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CAPZA1P52907 286 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 VBP1P61758 197 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SLC35A1P78382 337 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 PUDPQ08623 228 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 AIMP2Q13155 320 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 BCDIN3DQ7Z5W3 292 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SIAH3Q8IW03 269 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NLGN4YQ8NFZ3 816 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 HAS2Q92819 552 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 KCTD7Q96MP8 289 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NPAS1Q99742 590 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 C7orf50Q9BRJ6 194 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 FOXJ2Q9P0K8 574 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 FARSAQ9Y285 508 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ZC3H12DA2A288 527 aaKnown RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CEACAM18A8MTB9 384 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 POU2F1P14859 743 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 MYL12AP19105 171 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 RAB6AP20340 208 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 LHX2P50458 406 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 MMP15P51511 669 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NUDT6P53370 316 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF121P58317 390 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 IL1RL1Q01638 556 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CCDC92Q53HC0 331 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 CCDC157Q569K6 752 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 OLFML2AQ68BL7 652 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NANOGNBQ7Z5D8 188 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ZNF679Q8IYX0 411 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 RFLNBQ8N5W9 214 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 OR4F15Q8NGB8 312 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 ABHD4Q8TB40 342 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 THAP4Q8WY91 577 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 TXNDC15Q96J42 360 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 KLHL15Q96M94 604 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 OR2M2Q96R28 347 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 AKIRIN1Q9H9L7 192 aaPredicted RBP4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 NANSQ9NR45 359 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 SERINC1Q9NRX5 453 aa4.78□□□□□ -1.64
PRPF4B-201ENST00000337659 PAQR5Q9NXK6 330 aaPredicted RBP4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms