RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 ACOT7O00154 380 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 NPIPB7O75200 414 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 PSMB1P20618 241 aaKnown RBP12.89□□□□□ -0.35
LIPA-202ENST00000336233 P2RX1P51575 399 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 PNLIPRP2P54317 469 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 TMEM69Q5SWH9 247 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 STPG1Q5TH74 334 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 CPAMD8Q8IZJ3 1885 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 D2HGDHQ8N465 521 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 OR1L3Q8NH93 324 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 GPR148Q8TDV2 347 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 ASB17Q8WXJ9 295 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 TTC9Q92623 222 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 DAZLQ92904 295 aaKnown RBP12.89□□□□□ -0.35
LIPA-202ENST00000336233 MCHR2Q969V1 340 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 C4orf45Q96LM5 186 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 CITED4Q96RK1 184 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 SYT4Q9H2B2 425 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 LMAN1LQ9HAT1 526 aa12.89□□□□□ -0.35
LIPA-202ENST00000336233 RANBP2P49792 3224 aaKnown RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 MEN1O00255 615 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 GP1BBP13224 206 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 FBLP22087 321 aaKnown RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 BLVRAP53004 296 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 PRSS35Q8N3Z0 413 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 VSX1Q9NZR4 365 aaPredicted RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 IKZF2Q9UKS7 526 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 GMDSO60547 372 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 CDK2P24941 298 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 KIR3DL2P43630 455 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 PPM1FP49593 454 aaPredicted RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 MECP2P51608 486 aaKnown RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 POLR2HP52434 150 aaKnown RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 PLCXD2Q0VAA5 305 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 SNTA1Q13424 505 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 CBFBQ13951 182 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 TOMM34Q15785 309 aaPredicted RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 YOD1Q5VVQ6 348 aaPredicted RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 SHEQ5VZ18 495 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 HLA-DQA1Q5Y7H0 255 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 MTFR2Q6P444 385 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 DPY19L4Q7Z388 723 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 MARCH3Q86UD3 253 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 PM20D2Q8IYS1 436 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 OR1N1Q8NGS0 311 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 OR8B4Q96RC9 309 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 SLC23A1Q9UHI7 598 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
LIPA-202ENST00000336233 ELF5Q9UKW6 265 aaPredicted RBP12.88□□□□□ -0.35
LIPA-202ENST00000336233 IGHV1OR21-1A0A087WYE8 117 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 TPOP07202 933 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 HAAOP46952 286 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 CLDN12P56749 244 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 TAS2R20P59543 309 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 RPL27P61353 136 aaKnown RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 TMEM255AQ5JRV8 349 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZNF227Q86WZ6 799 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 DEFB119Q8N690 84 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZNF576Q9H609 170 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 DIABLOQ9NR28 239 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 DLL4Q9NR61 685 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 STEAP1Q9UHE8 339 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 UNC80Q8N2C7 3258 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 TRAV8-7A0A075B6U6 113 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 PRSS37A4D1T9 235 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 XKRYO14609 159 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 FADS1O60427 444 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 GLSO94925 669 aaPredicted RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 NR0B1P51843 470 aaKnown RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 PER3P56645 1201 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZP1P60852 638 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZP2Q05996 745 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 CAMK2DQ13557 499 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 METTL11BQ5VVY1 283 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 FAM109AQ8N4B1 249 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ZNF676Q8N7Q3 588 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 OR11H4Q8NGC9 324 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 C1orf216Q8TAB5 229 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 MS4A3Q96HJ5 214 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 SLC41A2Q96JW4 573 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 ELF4Q99607 663 aaPredicted RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 TBL1XR1Q9BZK7 514 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 DHCR7Q9UBM7 475 aaKnown RBP12.87□□□□□ -0.35
LIPA-202ENST00000336233 COPS7AQ9UBW8 275 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 B9D1Q9UPM9 204 aa12.87□□□□□ -0.35
LIPA-202ENST00000336233 PIAS2O75928 621 aa12.86□□□□□ -0.35
LIPA-202ENST00000336233 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
LIPA-202ENST00000336233 SOX2P48431 317 aa12.86□□□□□ -0.35
LIPA-202ENST00000336233 ROM1Q03395 351 aa12.86□□□□□ -0.35
LIPA-202ENST00000336233 ZBTB37Q5TC79 503 aa12.86□□□□□ -0.35
LIPA-202ENST00000336233 C5orf46Q6UWT4 87 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms