RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 RPS11P62280 158 aaKnown RBP eCLIP11.33□□□□□ -0.6
LIMK1-201ENST00000336180 KRT74Q7RTS7 529 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 MAMDC2Q7Z304 686 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-201ENST00000336180 NAT6Q93015 286 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 NMNAT2Q9BZQ4 307 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 ADAMTS20P59510 1910 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 NUP210LQ5VU65 1888 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 OR6C70A6NIJ9 312 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF814B7Z6K7 855 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 TRIM3O75382 744 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-201ENST00000336180 RENP00797 406 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 APOA1P02647 267 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 CD3GP09693 182 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 IFI6P09912 130 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 DEFA1P59665 94 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 DEFA3P59666 94 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PLA2G7Q13093 441 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PLXDC2Q6UX71 529 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF671Q8TAW3 534 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 OR5B2Q96R09 309 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PRMT8Q9NR22 394 aaPredicted RBP11.33□□□□□ -0.6
LIMK1-201ENST00000336180 KLHL13Q9P2N7 655 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 FBXL3Q9UKT7 428 aa11.33□□□□□ -0.6
LIMK1-201ENST00000336180 PLA2G10O15496 165 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 EEF1E1O43324 174 aaKnown RBP11.32□□□□□ -0.6
LIMK1-201ENST00000336180 KLK3P07288 261 aaPredicted RBP11.32□□□□□ -0.6
LIMK1-201ENST00000336180 RFC3P40938 356 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 SLC6A8P48029 635 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 LCN1P1Q5VSP4 162 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 TRIQKQ629K1 86 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 GRINAQ7Z429 371 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 AGBL5Q8NDL9 886 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 TP63Q9H3D4 680 aaPredicted RBP11.32□□□□□ -0.6
LIMK1-201ENST00000336180 CDCP1Q9H5V8 836 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 BEX1Q9HBH7 125 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 ISYNA1Q9NPH2 558 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 EXOSC3Q9NQT5 275 aaKnown RBP11.32□□□□□ -0.6
LIMK1-201ENST00000336180 FRRS1LQ9P0K9 344 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 NLKQ9UBE8 527 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 LOC101059948A0A1B0GTJ6 334 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 A8MVM7 634 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 RAB3BP20337 219 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 MPLP40238 635 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 INPP1P49441 399 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 ARHGDIBP52566 201 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 ADAM8P78325 824 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 CAMK2DQ13557 499 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
LIMK1-201ENST00000336180 PAMR1Q6UXH9 720 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 GPALPP1Q8IXQ4 340 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 TIGD4Q8IY51 512 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 AP3S1Q92572 193 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 SMIM19Q96E16 107 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 CENPMQ9NSP4 180 aa11.32□□□□□ -0.6
LIMK1-201ENST00000336180 A0A0G2JK05 382 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 TO15178 435 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ZFAND5O76080 213 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 CD53P19397 219 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 CDAP32320 146 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ACTC1P68032 377 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ACTA1P68133 377 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 TLE3Q04726 772 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 BMPERQ8N8U9 685 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 NXPE2Q96DL1 559 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 TGIF2Q9GZN2 237 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ELOVL3Q9HB03 270 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 LNP1A1A4G5 178 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 EIF4E2O60573 245 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 CCL3P10147 92 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 F8A1P23610 371 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ETV6P41212 452 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 OR2B6P58173 313 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 AGAP7PQ5VUJ5 663 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 FAM205BPQ63HN1 556 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 EXD3Q8N9H8 876 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 RNF166Q96A37 237 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 INTS14Q96SY0 518 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 SLC19A3Q9BZV2 496 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 MRPL22Q9NWU5 206 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ZFHX2Q9C0A1 2572 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 MAP1BP46821 2468 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 IGLV3-12A0A075B6K2 115 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 B8ZZF3 427 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 PLPP3O14495 311 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ZNHIT1O43257 154 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 LDOC1O95751 146 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 PNPP00491 289 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 THBS2P35442 1172 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 EVX1P49640 407 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 SELENBP1Q13228 472 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 HSD17B12Q53GQ0 312 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 FAM122CQ6P4D5 195 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.31□□□□□ -0.6
LIMK1-201ENST00000336180 C19orf18Q8NEA5 215 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 OR2T4Q8NH00 348 aa11.31□□□□□ -0.6
LIMK1-201ENST00000336180 LGALS14Q8TCE9 139 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms