RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 TCFL5Q9UL49 500 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 CHST2Q9Y4C5 530 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 CACNA1GO43497 2377 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 A0A0B4J203 849 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TEX13DA0A0J9YY54 714 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 VSTM2BA6NLU5 285 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 G3V3Y1 287 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 PRKNO60260 465 aaPredicted RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 RAB3DO95716 219 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 CD82P27701 267 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 AGTR1P30556 359 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TAGLNQ01995 201 aaKnown RBP10.77□□□□□ -0.69
HDAC6-201ENST00000334136 GPR50Q13585 617 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 INSL4Q14641 139 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 TMEM205Q6UW68 189 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 NDUFAF7Q7L592 441 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 NKAIN4Q8IVV8 208 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 ADAMTS14Q8WXS8 1223 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SEC22AQ96IW7 307 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 ST6GAL2Q96JF0 529 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 OR14A2Q96R54 314 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 V9GY05 133 aa10.77□□□□□ -0.69
HDAC6-201ENST00000334136 SCN2AQ99250 2005 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF891A8MT65 544 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 TLX3O43711 291 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 CD34P28906 385 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 CTXN1P60606 82 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 DGCR2P98153 550 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 POU4F2Q12837 409 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 MRM1Q6IN84 353 aaKnown RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 LIN37Q96GY3 246 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 PDCD1LG2Q9BQ51 273 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 NTNG1Q9Y2I2 539 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 NDUFB2O95178 105 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 M6PRP20645 277 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 S1PR1P21453 382 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 ETV6P41212 452 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 OR10A3P58181 314 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF362Q5T0B9 420 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 GPR155Q7Z3F1 870 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 SLC35F2Q8IXU6 374 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 APH1BQ8WW43 257 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF559Q9BR84 538 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 BOKQ9UMX3 212 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 RPH3AQ9Y2J0 694 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 CCL27Q9Y4X3 112 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 CDHR4A6H8M9 788 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 UBL3O95164 117 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 C1QCP02747 245 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 PER3P56645 1201 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 PCBP4P57723 403 aaKnown RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 RAP2BP61225 183 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 KRBOX4Q5JUW0 171 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF574Q6ZN55 896 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 FAM26EQ8N5C1 309 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 GCDHQ92947 438 aaPredicted RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 DCLRE1CQ96SD1 692 aaKnown RBP10.76□□□□□ -0.69
HDAC6-201ENST00000334136 STACQ99469 402 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 UBQLN3Q9H347 655 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 DHDHQ9UQ10 334 aa10.76□□□□□ -0.69
HDAC6-201ENST00000334136 C21orf140B9A014 251 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SEC14L5O43304 696 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 UTS2O95399 124 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 CBX5P45973 191 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SLC6A8P48029 635 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SLC6A9P48067 706 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 GPR143P51810 404 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 EXOSC2Q13868 293 aaKnown RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 OCLNQ16625 522 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF658BQ4V348 819 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 FAM69AQ5T7M9 428 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ALKBH2Q6NS38 261 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 C17orf107Q6ZR85 190 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 CD163Q86VB7 1156 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 C17orf82Q86X59 251 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ZADH2Q8N4Q0 377 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SUMF1Q8NBK3 374 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 FGF11Q92914 225 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 UCN3Q969E3 161 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 NUDT9Q9BW91 350 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 NXF5Q9H1B4 397 aaKnown RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SIDT1Q9NXL6 827 aaKnown RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 FLVCR2Q9UPI3 526 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 MEMO1Q9Y316 297 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 OR6C76A6NM76 312 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 MKRN2OSH3BPM6 223 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 CDX4O14627 284 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 TBX19O60806 448 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 RAF1P04049 648 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 HCKP08631 526 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ITGA5P08648 1049 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 PIPP12273 146 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 FUT1P19526 365 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 GDF1P27539 372 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 ZNF322Q6U7Q0 402 aaPredicted RBP10.75□□□□□ -0.69
HDAC6-201ENST00000334136 BBS1Q8NFJ9 593 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 OR1N1Q8NGS0 311 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 SLC35A4Q96G79 324 aa10.75□□□□□ -0.69
HDAC6-201ENST00000334136 DHRS9Q9BPW9 319 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms