RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 ALPK2Q86TB3 2170 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 A0A1B0GTH9 108 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 IFITM5A6NNB3 132 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 FTCDNL1E5RQL4 147 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 AIPO00170 330 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 PHYHO14832 338 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 IGHMP01871 453 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 HLA-DQA2P01906 255 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 SLC6A1P30531 599 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 GZMKP49863 264 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 INSM1Q01101 510 aaPredicted RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 HES5Q5TA89 166 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 HACD4Q5VWC8 232 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 PPP1R3BQ86XI6 285 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 EID2Q8N6I1 236 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 NSMAFQ92636 917 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 NAT6Q93015 286 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 AMELYQ99218 206 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 SPSB2Q99619 263 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 MRPL39Q9NYK5 338 aaKnown RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 STMN3Q9NZ72 180 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 VSX1Q9NZR4 365 aaPredicted RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 PCDHGA9Q9Y5G4 932 aaKnown RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 ALG5Q9Y673 324 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 LOC105371267A0A1B0GV96 52 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 ONECUT2O95948 504 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 MAPK3P27361 379 aaPredicted RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 OR3A3P47888 321 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 MMP15P51511 669 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 AGFG1P52594 562 aaKnown RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 PITPNAQ00169 270 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 UBE2NLQ5JXB2 153 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 OTPQ5XKR4 325 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 LRRC69Q6ZNQ3 347 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 CPEB2Q7Z5Q1 589 aaKnown RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 WDR5BQ86VZ2 330 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 ELMOD2Q8IZ81 293 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 FAM109AQ8N4B1 249 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 OR2G2Q8NGZ5 317 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 SNAPC3Q92966 411 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 PMEPA1Q969W9 287 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 ZFP3Q96NJ6 502 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 GUCD1Q96NT3 240 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 FOXN4Q96NZ1 517 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 GAREM1Q9H706 876 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 NIPAL2Q9H841 368 aa15.68■□□□□ 0.1
DDX28-201ENST00000332395 MRPS7Q9Y2R9 242 aaKnown RBP15.68■□□□□ 0.1
DDX28-201ENST00000332395 TRBV5-5A0A0J9YX44 114 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 OR4C45A6NMZ5 311 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 ZNF593O00488 134 aaPredicted RBP15.67■□□□□ 0.1
DDX28-201ENST00000332395 ORC5O43913 435 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 SLC16A7O60669 478 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CFIP05156 583 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 IL11P20809 199 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CENPAP49450 140 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 SUMO3P55854 103 aaPredicted RBP15.67■□□□□ 0.1
DDX28-201ENST00000332395 MELKQ14680 651 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 LCN10Q6JVE6 187 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 KRT74Q7RTS7 529 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 MAFAQ8NHW3 353 aaPredicted RBP15.67■□□□□ 0.1
DDX28-201ENST00000332395 ADAMTS14Q8WXS8 1223 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 YIPF5Q969M3 257 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CREB3L1Q96BA8 519 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 C8orf44Q96CB5 159 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CMTM3Q96MX0 182 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CRB3Q9BUF7 120 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 SLCO1C1Q9NYB5 712 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 MED11Q9P086 117 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CAMK2AQ9UQM7 478 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 CACNG2Q9Y698 323 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 V9GY05 133 aa15.67■□□□□ 0.1
DDX28-201ENST00000332395 IGLV1-36A0A0B4J1U3 117 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 C19orf67A6NJJ6 358 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 HSPB2A8KAH6 182 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 CD3GP09693 182 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 CTLA4P16410 223 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 SOX2P48431 317 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 SRP9P49458 86 aaKnown RBP15.66■□□□□ 0.1
DDX28-201ENST00000332395 HSPB2Q16082 182 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 SLC36A2Q495M3 483 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 BICRALQ6AI39 1079 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 ARSKQ6UWY0 536 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 BAIAP2L2Q6UXY1 529 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 STAC2Q6ZMT1 411 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 OR5L2Q8NGL0 311 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 OR8K3Q8NH51 312 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 EDAQ92838 391 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 CITED4Q96RK1 184 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 COMMD4Q9H0A8 199 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 TCF7L1Q9HCS4 588 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 OCIAD1Q9NX40 245 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 VDAC3Q9Y277 283 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 SLC22A23A1A5C7 686 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 TMEM212A6NML5 194 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 PDGFBP01127 241 aaPredicted RBP15.66■□□□□ 0.1
DDX28-201ENST00000332395 C1QBP02746 253 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 NAGAP17050 411 aa15.66■□□□□ 0.1
DDX28-201ENST00000332395 APOBEC1P41238 236 aaKnown RBP15.66■□□□□ 0.1
DDX28-201ENST00000332395 BLVRAP53004 296 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms