RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 HIST1H2ACQ93077 130 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 CLIP3Q96DZ5 547 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 ELMOD3Q96FG2 381 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 TOE1Q96GM8 510 aaKnown RBP13.92□□□□□ -0.18
BRCC3-201ENST00000330045 TCTN2Q96GX1 697 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 CCDC120Q96HB5 630 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 MNTQ99583 582 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 FOXQ1Q9C009 403 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 TMEM184BQ9Y519 407 aaPredicted RBP13.92□□□□□ -0.18
BRCC3-201ENST00000330045 NUP210LQ5VU65 1888 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 H0YC42 278 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 OR2A4O95047 310 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 UTS2O95399 124 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 IL33O95760 270 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 CXCL2P19875 107 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 FAUP35544 74 aaKnown RBP13.92□□□□□ -0.18
BRCC3-201ENST00000330045 SERTAD2Q14140 314 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 PCGF3Q3KNV8 242 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 MAMSTRQ6ZN01 415 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 OR8K3Q8NH51 312 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 OR2A7Q96R45 310 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 ULBP3Q9BZM4 244 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 TMEM14AQ9Y6G1 99 aa13.92□□□□□ -0.18
BRCC3-201ENST00000330045 A0A1W2PPL8 197 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 H7C417 338 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 PYCARD-AS1I3L0S3 204 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 L7N2F9 121 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SRFP11831 508 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 NFYAP23511 347 aaPredicted RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 TACR3P29371 465 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 GALNSP34059 522 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 TDGQ13569 410 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 WDR45BQ5MNZ6 344 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 EEF1A1P5Q5VTE0 462 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 HDDC2Q7Z4H3 204 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SIX5Q8N196 739 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 PRSS35Q8N3Z0 413 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 TAAR8Q969N4 342 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 MSANTD3Q96H12 275 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SFXN2Q96NB2 322 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 INTS14Q96SY0 518 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 PELOQ9BRX2 385 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SYT4Q9H2B2 425 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 PRDM6Q9NQX0 595 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 MTFP1Q9UDX5 166 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 GMEB2Q9UKD1 530 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 TMEM131Q92545 1883 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 OR2M5A3KFT3 312 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SCO1O75880 301 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 CSRP1P21291 193 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 RASGEF1BQ0VAM2 473 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SMAD2Q15796 467 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SLC38A6Q8IZM9 456 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF321PQ8N8H1 164 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 OR52B4Q8NGK2 314 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 OIT3Q8WWZ8 545 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 OMA1Q96E52 524 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 DCBLD2Q96PD2 775 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 KLHDC3Q9BQ90 382 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SEMA4CQ9C0C4 833 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 NXF5Q9H1B4 397 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 LMAN1LQ9HAT1 526 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SPEF1Q9Y4P9 236 aa13.91□□□□□ -0.18
BRCC3-201ENST00000330045 TDRD6O60522 2096 aaKnown RBP13.91□□□□□ -0.18
BRCC3-201ENST00000330045 SNAPC5O75971 98 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 GPANK1O95872 356 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 PPICP45877 212 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 SLC37A1P57057 533 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 DMWDQ09019 674 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 RBMS2Q15434 407 aaKnown RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 OR5M10Q6IEU7 315 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 ANKRD16Q6P6B7 361 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 FAM198BQ6UWH4 519 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 C3P1Q6ZMU1 363 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 OR51D1Q8NGF3 324 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 MCHR2Q969V1 340 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 WDR89Q96FK6 387 aaPredicted RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 ELF4Q99607 663 aaPredicted RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 TMPRSS13Q9BYE2 586 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 PNO1Q9NRX1 252 aaKnown RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 TAS2R8Q9NYW2 309 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 ZNF224Q9NZL3 707 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 TUBAL3A6NHL2 446 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 PHYHO14832 338 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 SMUG1Q53HV7 270 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 KIAA0895LQ68EN5 471 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 NHLRC1Q6VVB1 395 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 CHMP1BQ7LBR1 199 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 NUP54Q7Z3B4 507 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 PM20D2Q8IYS1 436 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 OR4C16Q8NGL9 310 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 PTPMT1Q8WUK0 201 aaPredicted RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 CDX2Q99626 313 aaPredicted RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 GINS4Q9BRT9 223 aa13.9□□□□□ -0.18
BRCC3-201ENST00000330045 ING1Q9UK53 422 aaPredicted RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 CDV3Q9UKY7 258 aaKnown RBP13.9□□□□□ -0.18
BRCC3-201ENST00000330045 LOC105371267A0A1B0GV96 52 aa13.89□□□□□ -0.19
BRCC3-201ENST00000330045 UBE2QL1A1L167 161 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms