RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 C19orf84I3L1E1 186 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 SLC22A1O15245 554 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 AHCYL1O43865 530 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 HIST1H1CP16403 213 aaKnown RBP14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 CCNA2P20248 432 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 SLC2A5P22732 501 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 SRD5A2P31213 254 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 BLVRAP53004 296 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 CLDN15P56746 228 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 FOXF1Q12946 379 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 GGTLC2Q14390 218 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 PON3Q15166 354 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 ZNF787Q6DD87 383 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 GDPGP1Q6ZNW5 385 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 H1FNTQ75WM6 255 aaPredicted RBP14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 P2RY8Q86VZ1 359 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 ZNF808Q8N4W9 903 aaPredicted RBP14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 OR52E2Q8NGJ4 325 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 OR52N1Q8NH53 320 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 C12orf43Q96C57 262 aaKnown RBP14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 MGLLQ99685 303 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 VDAC3Q9Y277 283 aa14.67□□□□□ -0.06
PDLIM1-201ENST00000329399 APCP25054 2843 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 A6NIZ1 184 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 H0YC42 278 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 GABARAPO95166 117 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 SLC2A10O95528 541 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 RENP00797 406 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 SCG5P05408 212 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 WNT4P56705 351 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 RAP1BP61224 184 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 RAP1AP62834 184 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 BDH1Q02338 343 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 ACSM1Q08AH1 577 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 MLLT11Q13015 90 aaPredicted RBP14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 CRMP1Q14194 572 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 ZNF239Q16600 458 aaKnown RBP14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 ARMCX4Q5H9R4 360 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 POMZP3Q6PJE2 187 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 TMPRSS11AQ6ZMR5 421 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 HDDC2Q7Z4H3 204 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 BCDIN3DQ7Z5W3 292 aaKnown RBP14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 LIX1LQ8IVB5 337 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 ACBD7Q8N6N7 88 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 NPEPL1Q8NDH3 523 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 DDOQ99489 341 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 PIGQQ9BRB3 760 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 NMNAT2Q9BZQ4 307 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 PRDM14Q9GZV8 571 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 TXNIPQ9H3M7 391 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 TAS2R5Q9NYW4 299 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 CAMK2AQ9UQM7 478 aa14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 LSM2Q9Y333 95 aaKnown RBP14.66□□□□□ -0.06
PDLIM1-201ENST00000329399 A0A0G2JNJ9 132 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 A0A1W2PRG6 482 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 LRRN3E7EW58 273 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 H3BMQ9 156 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 J3QRE1 110 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 CCRL2O00421 344 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 PLPP3O14495 311 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 XKRYO14609 159 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 DNPH1O43598 174 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 PTHP01270 115 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 LCKP06239 509 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 CD36P16671 472 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 GRPRP30550 384 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 LHX2P50458 406 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 SRYQ05066 204 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 MED22Q15528 200 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 C1orf185Q5T7R7 199 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 KLHL36Q8N4N3 616 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 MOSPD2Q8NHP6 518 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 POC1BQ8TC44 478 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 HAVCR2Q8TDQ0 301 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 OTULINQ96BN8 352 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 SLC25A36Q96CQ1 311 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 NMD3Q96D46 503 aaKnown RBP14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 MNTQ99583 582 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 SEC14L4Q9UDX3 406 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 Q9UFV3 132 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 DKKL1Q9UK85 242 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 CAB39Q9Y376 341 aaPredicted RBP14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 NOX1Q9Y5S8 564 aa14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 INTS1Q8N201 2190 aaKnown RBP14.65□□□□□ -0.06
PDLIM1-201ENST00000329399 MPDZO75970 2070 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 CSMD2Q7Z408 3487 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 LOC102725191A0A1B0GVB3 256 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 ZC3H12DA2A288 527 aaKnown RBP14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 LIPT2A6NK58 231 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 TFPIP10646 304 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 RGS6P49758 472 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 DIO1P49895 249 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 DAP3P51398 398 aaKnown RBP14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 CLDN18P56856 261 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 RPL27P61353 136 aaKnown RBP14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 RPS7P62081 194 aaKnown RBP14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 ERVK-25P63136 954 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 HSF2Q03933 536 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 PUDPQ08623 228 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 ACSF3Q4G176 576 aaPredicted RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms