RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 CDC40O60508 579 aaKnown RBP eCLIP12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 RBBP9O75884 186 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 KDM4BO94953 1096 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 RAB40ALP0C0E4 278 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 RORAP35398 523 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC37A1P57057 533 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 IGLV3-21P80748 117 aaPredicted RBP12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 SERTAD2Q14140 314 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 COL28A1Q2UY09 1125 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 VWA2Q5GFL6 755 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF684Q5T5D7 378 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF227Q86WZ6 799 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 GPR148Q8TDV2 347 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 RAB40AQ8WXH6 277 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 DVL3Q92997 716 aaPredicted RBP12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 MIB2Q96AX9 1013 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 ELMOD3Q96FG2 381 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC7A5P2Q9GIP4 190 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 GMEB2Q9UKD1 530 aa12.73□□□□□ -0.37
ATP2C1-201ENST00000328560 OR4C45A6NMZ5 311 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 SMAD9O15198 467 aaKnown RBP12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC16A7O60669 478 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 IFNA7P01567 189 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ASAH2BP0C7U1 165 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 SLC25A1P53007 311 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF117Q03924 483 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ETFDHQ16134 617 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 NHLRC1Q6VVB1 395 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 KCTD20Q7Z5Y7 419 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 SIX5Q8N196 739 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 SORCS2Q96PQ0 1159 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 GLTPQ9NZD2 209 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 CA14Q9ULX7 337 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 IFI6P09912 130 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 GLULP15104 373 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ALOX5APP20292 161 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 RAG2P55895 527 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 OR7E24Q6IFN5 339 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 COMMD7Q86VX2 200 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 CDC20BQ86Y33 519 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 LRRC75AQ8NAA5 344 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 LCORQ96JN0 433 aaPredicted RBP12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 GPX7Q96SL4 187 aaPredicted RBP12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 TMEM138Q9NPI0 162 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF224Q9NZL3 707 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 UBQLN2Q9UHD9 624 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 CREBL2O60519 120 aaPredicted RBP12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 IL33O95760 270 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 CLPSP04118 112 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ZNF250P15622 560 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 PPICP45877 212 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 NSDHLQ15738 373 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 WDR38Q5JTN6 314 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 MDGA2Q7Z553 956 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 PLPP7Q8NBV4 271 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 HGDQ93099 445 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 PMEPA1Q969W9 287 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ZDHHC12Q96GR4 267 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 MSANTD3Q96H12 275 aa12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 MRTO4Q9UKD2 239 aaKnown RBP12.72□□□□□ -0.37
ATP2C1-201ENST00000328560 ANKRD20A5PA0PJZ0 165 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 C2orf72A6NCS6 295 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 PYCARD-AS1I3L0S3 204 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 CD1AP06126 327 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 CALCBP10092 127 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 MELKQ14680 651 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 ISXQ2M1V0 245 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 PRSS35Q8N3Z0 413 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 OR4D10Q8NGI6 311 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 LRRC20Q8TCA0 184 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 MFRPQ9BY79 579 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 OR11A1Q9GZK7 315 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 CUTCQ9NTM9 273 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 BLACEA4D250 179 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 NAP1L6A6NFF2 107 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 RGS11O94810 467 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 ABHD16AO95870 558 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 GTF2F2P13984 249 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 PUDPQ08623 228 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 LRRTM1Q86UE6 522 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 EXD3Q8N9H8 876 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 PELOQ9BRX2 385 aaKnown RBP12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 NUDT9Q9BW91 350 aa12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 GPN1Q9HCN4 374 aaPredicted RBP12.71□□□□□ -0.37
ATP2C1-201ENST00000328560 L7N2F9 121 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 PRAF2O60831 178 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 MYF5P13349 255 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 POU3F4P49335 361 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 HNRNPKP61978 463 aaKnown RBP eCLIP12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 PLCXD2Q0VAA5 305 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 C11orf88Q6PI97 169 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 KRT77Q7Z794 578 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF417Q8TAU3 575 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 ZNF578Q96N58 590 aaPredicted RBP12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 OR1F2PQ96R84 312 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 ZMAT3Q9HA38 289 aaKnown RBP12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 PTTG3PQ9NZH4 202 aa12.71□□□□□ -0.38
ATP2C1-201ENST00000328560 RABL2AQ9UBK7 228 aaPredicted RBP12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms