RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 TSPAN32Q96QS1 320 aa16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 CNN2Q99439 309 aaKnown RBP16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 EXO5Q9H790 373 aa16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 ASB6Q9NWX5 421 aa16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 NPIPA1Q9UND3 350 aa16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 MOKQ9UQ07 419 aa16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 SF3B6Q9Y3B4 125 aaKnown RBP16.77■□□□□ 0.27
EXOSC3-201ENST00000327304 SPENQ96T58 3664 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 ATRXP46100 2492 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 TNFSF11O14788 317 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 GLCEO94923 617 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 OR2T7P0C7T2 308 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 CLDN15P56746 228 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 OR2B6P58173 313 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 GPR50Q13585 617 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 KRR1Q13601 381 aaKnown RBP16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 SOWAHCQ53LP3 525 aaPredicted RBP16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 TMPPEQ6ZT21 453 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 OR2T27Q8NH04 317 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF417Q8TAU3 575 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 ABTB1Q969K4 478 aaPredicted RBP16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 MIB2Q96AX9 1013 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 ADGRG7Q96K78 797 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF587Q96SQ5 575 aaPredicted RBP16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 TIMP4Q99727 224 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 PLGRKTQ9HBL7 147 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 INIPQ9NRY2 104 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 BABAM2Q9NXR7 383 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 PMF1-BGLAPU3KQ54 211 aa16.76■□□□□ 0.27
EXOSC3-201ENST00000327304 GJE1A6NN92 205 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 EIF1AYO14602 144 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 LALBAP00709 142 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 MRPL3P09001 348 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ENTPD1P49961 510 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 CLDN18P56856 261 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF829Q3KNS6 432 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 SCAIQ8N9R8 606 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZMYND19Q96E35 227 aaPredicted RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 SNX18Q96RF0 628 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 COQ7Q99807 217 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 RNF167Q9H6Y7 350 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 EXOSC4Q9NPD3 245 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ALKBH4Q9NXW9 302 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF346Q9UL40 294 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 NBEAQ8NFP9 2946 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF670-ZNF695F2Z2N8 137 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 SULT2B1O00204 365 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 PLPP3O14495 311 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 FZD7O75084 574 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 OR6A2O95222 327 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 IGHMP01871 453 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 MT-ND5P03915 603 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 KLK2P20151 261 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF85Q03923 595 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZP4Q12836 540 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 MESTQ5EB52 335 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 VASNQ6EMK4 673 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 CD200R1LQ6Q8B3 271 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 TEX19Q8NA77 164 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 ZPLD1Q8TCW7 415 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 NXF2Q9GZY0 626 aaKnown RBP16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 SLC25A18Q9H1K4 315 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 MMP27Q9H306 513 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 TRAPPC4Q9Y296 219 aa16.75■□□□□ 0.27
EXOSC3-201ENST00000327304 METTL15A6NJ78 407 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 RNF13O43567 381 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 AKR7A3O95154 331 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 PMS2P2O95744 297 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ACTL6AO96019 429 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 RENP00797 406 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 CRYABP02511 175 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF708P17019 499 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 BMXP51813 675 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 HSF1Q00613 529 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 SRYQ05066 204 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 C3AR1Q16581 482 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNF404Q494X3 552 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 LINC01590Q5TEZ4 76 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 PCSK4Q6UW60 755 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ESPNLQ6ZVH7 1005 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ARIH2OSQ8N7S6 290 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 OR2V1Q8NHB1 315 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 TBX5Q99593 518 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 SRXN1Q9BYN0 137 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 ISG20L2Q9H9L3 353 aaKnown RBP16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 TRIM36Q9NQ86 728 aa16.74■□□□□ 0.27
EXOSC3-201ENST00000327304 A0A1W2PQL4 384 aaPredicted RBP16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 ZNHIT1O43257 154 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 GALP22466 123 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 GTF2E2P29084 291 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 FGF9P31371 208 aaPredicted RBP16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 TAS2R43P59537 309 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 RPL27P61353 136 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 LY6DQ14210 128 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 ST3GAL2Q16842 350 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 HBMQ6B0K9 141 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 FAM180AQ6UWF9 173 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 KLBQ86Z14 1044 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 CROCCP3Q8IVE0 287 aa16.73■□□□□ 0.27
EXOSC3-201ENST00000327304 CISD2Q8N5K1 135 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms