RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 FAM157BP0CG42 384 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 FUT1P19526 365 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 HNF1AP20823 631 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 CDH15P55291 814 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 RAB1AP62820 205 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 FMODQ06828 376 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 RPL18Q07020 188 aaKnown RBP10.6□□□□□ -0.71
TPM3-204ENST00000323144 GKAP1Q5VSY0 366 aaPredicted RBP10.6□□□□□ -0.71
TPM3-204ENST00000323144 REP15Q6BDI9 236 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 CGB2Q6NT52 195 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 DEF8Q6ZN54 512 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 NKAIN4Q8IVV8 208 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 SLC22A24Q8N4F4 322 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 OR4K5Q8NGD3 323 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 ASB10Q8WXI3 467 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 YIPF5Q969M3 257 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 ZNF566Q969W8 418 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 ZNF347Q96SE7 839 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 C20orf141Q9NUB4 165 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 TRIM33Q9UPN9 1127 aa10.6□□□□□ -0.71
TPM3-204ENST00000323144 DHHO43323 396 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 OR6A2O95222 327 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 SLC2A10O95528 541 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 CLPTM1O96005 669 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 NAT2P11245 290 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 FUT4P22083 530 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 GLRXP35754 106 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 RPS23P62266 143 aaKnown RBP10.59□□□□□ -0.71
TPM3-204ENST00000323144 GALK2Q01415 458 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 GLO1Q04760 184 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 ZP4Q12836 540 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 HNRNPA0Q13151 305 aaKnown RBP10.59□□□□□ -0.71
TPM3-204ENST00000323144 TMEM255AQ5JRV8 349 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 LRFN4Q6PJG9 635 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 CALHM3Q86XJ0 350 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 SLC30A8Q8IWU4 369 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 SLC30A7Q8NEW0 376 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 IL17RDQ8NFM7 739 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 MOSPD2Q8NHP6 518 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 CLDND2Q8NHS1 167 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 SLC26A7Q8TE54 656 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 SLC25A44Q96H78 314 aaPredicted RBP10.59□□□□□ -0.71
TPM3-204ENST00000323144 C1orf159Q96HA4 380 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 GMPR2Q9P2T1 348 aaKnown RBP10.59□□□□□ -0.71
TPM3-204ENST00000323144 REV1Q9UBZ9 1251 aa10.59□□□□□ -0.71
TPM3-204ENST00000323144 IGKV1D-43A0A0B4J1Z2 117 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 FAM157AC9JC47 383 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 MCIDASD6RGH6 385 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 MRASO14807 208 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 RP2O75695 350 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 OR7A10O76100 309 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 IGHG1P01857 330 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 QDPRP09417 244 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 H2AFXP16104 143 aaPredicted RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 AQP2P41181 271 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 MAGEB1P43366 347 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 OR1E2P47887 323 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 CLRN1P58418 232 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 TAS2R41P59536 307 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 TOP3AQ13472 1001 aaPredicted RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 LRRC23Q53EV4 343 aaPredicted RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 INTS11Q5TA45 600 aaKnown RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 NANOGP8Q6NSW7 305 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 CCDC80Q76M96 950 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 SNX32Q86XE0 403 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 MEX3DQ86XN8 651 aaKnown RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 SYT14Q8NB59 555 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 MPP4Q96JB8 637 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 SEPHS2Q99611 448 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 SLC19A3Q9BZV2 496 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 NANOGQ9H9S0 305 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 LPAR2Q9HBW0 351 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 ZNF275Q9NSD4 429 aaPredicted RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 FBXO9Q9UK97 447 aaPredicted RBP10.58□□□□□ -0.72
TPM3-204ENST00000323144 SH3GLB1Q9Y371 365 aa10.58□□□□□ -0.72
TPM3-204ENST00000323144 BLOC1S5-TXNDC5H3BN57 136 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 TRMUO75648 421 aaKnown RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 SERPINA5P05154 406 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 MMP7P09237 267 aaPredicted RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 OR8G3PP0DMU2 310 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 SAGP10523 405 aaPredicted RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 ITGA2P17301 1181 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 CDAP32320 146 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 GPR6P46095 362 aaPredicted RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 EVX1P49640 407 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 HIST3H3Q16695 136 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 PIWIL3Q7Z3Z3 882 aaKnown RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 IGFN1Q86VF2 1251 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 CLDN22Q8N7P3 220 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 ICA1LQ8NDH6 482 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 TSPEARQ8WU66 669 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 HDAC2Q92769 488 aaKnown RBP10.57□□□□□ -0.72
TPM3-204ENST00000323144 HPS1Q92902 700 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 MCHR2Q969V1 340 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 NABP1Q96AH0 204 aa10.57□□□□□ -0.72
TPM3-204ENST00000323144 CDH20Q9HBT6 801 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms