RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 GLTPQ9NZD2 209 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 H2AFY2Q9P0M6 372 aaPredicted RBP12.05□□□□□ -0.48
PRPF18-201ENST00000320054 AASSQ9UDR5 926 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 TINAGQ9UJW2 476 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 MOKQ9UQ07 419 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 EMC9Q9Y3B6 208 aa12.05□□□□□ -0.48
PRPF18-201ENST00000320054 E9PLN8 166 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 H7C1C5 153 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 ENTPD6O75354 484 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 TOXO94900 526 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 TMIGD3P0DMS9 266 aaPredicted RBP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 SPI1P17947 270 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 CA7P43166 264 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 OR3A2P47893 321 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 CENPAP49450 140 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 LCN6P62502 163 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 LGALS3BPQ08380 585 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 STK11Q15831 433 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 SLC25A47Q6Q0C1 308 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 MEPCEQ7L2J0 689 aaKnown RBP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 NUFIP2Q7Z417 695 aaKnown RBP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 OR6V1Q8N148 313 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 POMGNT2Q8NAT1 580 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 GALNT11Q8NCW6 608 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 OR6K3Q8NGY3 331 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 OR6N1Q8NGY5 312 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 APH1AQ96BI3 265 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 OTULINQ96BN8 352 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 VKORC1Q9BQB6 163 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 YTHDF1Q9BYJ9 559 aaKnown RBP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 NUAK2Q9H093 628 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 RACGAP1Q9H0H5 632 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 MED20Q9H944 212 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 B3GAT2Q9NPZ5 323 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 RPRD1BQ9NQG5 326 aaKnown RBP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 ASB6Q9NWX5 421 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 DNAJC27Q9NZQ0 273 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.04□□□□□ -0.48
PRPF18-201ENST00000320054 B9D1Q9UPM9 204 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 PCDHGB5Q9Y5G0 923 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
PRPF18-201ENST00000320054 NBASA2RRP1 2371 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 IGLV1-36A0A0B4J1U3 117 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 SLC22A31A6NKX4 558 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 B8ZZF3 427 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 SLC16A7O60669 478 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 KHDRBS3O75525 346 aaKnown RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 TNFSF13O75888 250 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 GLCEO94923 617 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 STSP08842 583 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 CCDC159P0C7I6 412 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 CTLA4P16410 223 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 HTR1FP30939 366 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 KIR2DL2P43627 348 aaPredicted RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 BLVRAP53004 296 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 CDH11P55287 796 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 PER3P56645 1201 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 APOFQ13790 326 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 RBM48Q5RL73 367 aaKnown RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 C10orf128Q5T292 105 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 CARD17Q5XLA6 110 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 TMEM211Q6ICI0 200 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 LRFN4Q6PJG9 635 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 UGT2A3Q6UWM9 527 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 BCDIN3DQ7Z5W3 292 aaKnown RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 ZNF100Q8IYN0 542 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 GPR137CQ8N3F9 429 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 RPRMLQ8N4K4 120 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 BBS1Q8NFJ9 593 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 OR9Q1Q8NGQ5 310 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 MCHR2Q969V1 340 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 DMRTA2Q96SC8 542 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 TEAD3Q99594 435 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 SRA1Q9HD15 236 aaKnown RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 HAO2Q9NYQ3 351 aa12.03□□□□□ -0.48
PRPF18-201ENST00000320054 WARS2Q9UGM6 360 aaKnown RBP12.03□□□□□ -0.48
PRPF18-201ENST00000320054 MYO7BQ6PIF6 2116 aa12.02□□□□□ -0.48
PRPF18-201ENST00000320054 CHD6Q8TD26 2715 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 TRGV8A0A0C4DH27 118 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 CCDC182A6NF36 153 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 HSPB2A8KAH6 182 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 RPL36A-HNRNPH2H7BZ11 118 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 SLC1A7O00341 560 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 DCTN6O00399 190 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 UPK3AO75631 287 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 CNOT4O95628 575 aaKnown RBP12.02□□□□□ -0.49
PRPF18-201ENST00000320054 IL18BPO95998 194 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 QDPRP09417 244 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 CLUP10909 449 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 CTSSP25774 331 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 FMO3P31513 532 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 FMODQ06828 376 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 FOXF2Q12947 444 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 GGTLC2Q14390 218 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 HSPB2Q16082 182 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 SMN1Q16637 294 aaKnown RBP12.02□□□□□ -0.49
PRPF18-201ENST00000320054 PHYHD1Q5SRE7 291 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 LINC01590Q5TEZ4 76 aa12.02□□□□□ -0.49
PRPF18-201ENST00000320054 TSPO2Q5TGU0 170 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms