RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 DCBLD2Q96PD2 775 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 GABRG3Q99928 467 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 CCDC3Q9BQI4 270 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 MFFQ9GZY8 342 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 SLC25A32Q9H2D1 315 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 GPR160Q9UJ42 338 aa17.32■□□□□ 0.36
RTN4-201ENST00000317610 SRPX2O60687 465 aaPredicted RBP17.31■□□□□ 0.36
RTN4-201ENST00000317610 PRSS3P35030 304 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 NNATQ16517 81 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 MESTQ5EB52 335 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 TMEM240Q5SV17 173 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 GPX8Q8TED1 209 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 HRASLS2Q9NWW9 162 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 TMEM14AQ9Y6G1 99 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 LRP4O75096 1905 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 TRAV18A0A075B6X5 111 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 PHYHO14832 338 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 CDC40O60508 579 aaKnown RBP eCLIP17.31■□□□□ 0.36
RTN4-201ENST00000317610 KDM4BO94953 1096 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 WNT11O96014 354 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 EIF2B5Q13144 721 aaKnown RBP17.31■□□□□ 0.36
RTN4-201ENST00000317610 EEF1A1P5Q5VTE0 462 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 FAM166AQ6J272 317 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 OR6N2Q8NGY6 317 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 ELSPBP1Q96BH3 223 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 MRPS24Q96EL2 167 aaKnown RBP17.31■□□□□ 0.36
RTN4-201ENST00000317610 TSPAN32Q96QS1 320 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 LPAR4Q99677 370 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 CHST6Q9GZX3 395 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 EXO5Q9H790 373 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 TMEM138Q9NPI0 162 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 FBXL2Q9UKC9 423 aa17.31■□□□□ 0.36
RTN4-201ENST00000317610 TRAV14DV4A0A0A6YYC5 116 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 SLC17A2O00624 439 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CD3DP04234 171 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 ITGA5P08648 1049 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 IL32P24001 234 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 NTSR1P30989 418 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 SORDQ00796 357 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 EGR4Q05215 589 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 SRSF5Q13243 272 aaKnown RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 ALG11Q2TAA5 492 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 STEAP1BQ6NZ63 245 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CFAP77Q6ZQR2 320 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 C10orf53Q8N6V4 93 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 OR8K3Q8NH51 312 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 C16orf52Q8NHV5 167 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 PATE1Q8WXA2 126 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 FBRSQ9HAH7 460 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 ZC4H2Q9NQZ6 224 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CPNE7Q9UBL6 633 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 GRHPRQ9UBQ7 328 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 ERVK-19Q9WJR5 959 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CLDN16Q9Y5I7 305 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 LOC100289279A0A1B0GTE1 492 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CHURC1-FNTBB4DL54 471 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 PMS2P2O95744 297 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 RLN2P04090 185 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 F13BP05160 661 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 CTSBP07858 339 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 COL9A1P20849 921 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 TPMTP51580 245 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 UBE2IP63279 158 aaKnown RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 RPL18Q07020 188 aaKnown RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 MELKQ14680 651 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 RAB11BQ15907 218 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 C2orf76Q3KRA6 126 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 WDR38Q5JTN6 314 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 DPY19L4Q7Z388 723 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 EDAQ92838 391 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 FAM3DQ96BQ1 224 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 PELOQ9BRX2 385 aaKnown RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 MYOZ1Q9NP98 299 aaPredicted RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 CDV3Q9UKY7 258 aaKnown RBP17.3■□□□□ 0.36
RTN4-201ENST00000317610 OR10H1Q9Y4A9 318 aa17.3■□□□□ 0.36
RTN4-201ENST00000317610 C5orf42Q9H799 3197 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 DOCK8Q8NF50 2099 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 A0A1W2PQF6 199 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 SULT1C2O00338 296 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 UBBP0CG47 229 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 UBCP0CG48 685 aaKnown RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 MGMTP16455 207 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 RPS27AP62979 156 aaKnown RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 UBA52P62987 128 aaKnown RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 FUT7Q11130 342 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 C4orf46Q504U0 113 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 LY6G6FQ5SQ64 297 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 NUP54Q7Z3B4 507 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 GABRG1Q8N1C3 465 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 CCDC107Q8WV48 283 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 INTS14Q96SY0 518 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 ULBP3Q9BZM4 244 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 DNTTIP1Q9H147 329 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 FAM60AQ9NP50 221 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 H7C1C5 153 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 OIP5O43482 229 aa17.29■□□□□ 0.36
RTN4-201ENST00000317610 EIF4E2O60573 245 aaKnown RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 CDC123O75794 336 aaPredicted RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 RNH1P13489 461 aaKnown RBP17.29■□□□□ 0.36
RTN4-201ENST00000317610 ACTBP60709 375 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms