RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 RGP1Q92546 391 aaPredicted RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 KCTD12Q96CX2 325 aaKnown RBP16.49■□□□□ 0.23
CCDC43-201ENST00000315286 TXNDC15Q96J42 360 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 C5orf34Q96MH7 638 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 B3GAT2Q9NPZ5 323 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 SERINC1Q9NRX5 453 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 ALKBH4Q9NXW9 302 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 FRRS1LQ9P0K9 344 aa16.49■□□□□ 0.23
CCDC43-201ENST00000315286 A0A1B0GTH9 108 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 NPIPA5E9PKD4 350 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 SSR4P51571 173 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 HSF1Q00613 529 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 POU3F1Q03052 451 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-201ENST00000315286 ALKBH1Q13686 389 aaKnown RBP16.48■□□□□ 0.23
CCDC43-201ENST00000315286 TAB1Q15750 504 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 CEP78Q5JTW2 689 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 METAP1DQ6UB28 335 aaPredicted RBP16.48■□□□□ 0.23
CCDC43-201ENST00000315286 PPP1R32Q7Z5V6 425 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 RPS19BP1Q86WX3 136 aaKnown RBP16.48■□□□□ 0.23
CCDC43-201ENST00000315286 EGFL6Q8IUX8 553 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 PTGES2Q9H7Z7 377 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 SLCO1C1Q9NYB5 712 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 TCFL5Q9UL49 500 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 NPIPA1Q9UND3 350 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 KNTC1P50748 2209 aa16.48■□□□□ 0.23
CCDC43-201ENST00000315286 LINC00854A0A1B0GVQ3 168 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 A0A1W2PQ72 361 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 PIN1P1O15428 100 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 SLC19A2O60779 497 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 APOA1P02647 267 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 CCL3P10147 92 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 OTX2P32243 289 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 YIF1BQ5BJH7 314 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 SLC35D2Q76EJ3 337 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 NAXDQ8IW45 347 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 SETD6Q8TBK2 473 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 CT55Q8WUE5 264 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 ORAI1Q96D31 301 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 TAAR9Q96RI9 348 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 NOX4Q9NPH5 578 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 MED29Q9NX70 200 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 ADAM30Q9UKF2 790 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 B3GALT5Q9Y2C3 310 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 COA3Q9Y2R0 106 aaPredicted RBP16.47■□□□□ 0.23
CCDC43-201ENST00000315286 A6NIZ1 184 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 ACOD1A6NK06 481 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 FAM25AB3EWG3 89 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 FAM25CB3EWG5 89 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 FAM25GB3EWG6 89 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 ZNF879B4DU55 563 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 FAM47E-STBD1D6RA91 191 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 PAHP00439 452 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 IGHEP01854 428 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 CRABP1P29762 137 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 DAP3P51398 398 aaKnown RBP16.47■□□□□ 0.23
CCDC43-201ENST00000315286 BLVRAP53004 296 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 MLF1P58340 268 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 RAP1BP61224 184 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 RAP1AP62834 184 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 SCN1BQ07699 218 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 IL18Q14116 193 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 HSD17B12Q53GQ0 312 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 C3orf33Q6P1S2 294 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 TRILQ7L0X0 811 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 PLCZ1Q86YW0 608 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 PROK2Q9HC23 129 aa16.47■□□□□ 0.23
CCDC43-201ENST00000315286 A0A1W2PNR3 127 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 BOLA2-SMG1P6H3BVE0 249 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 PHYHO14832 338 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 MPZL1O95297 269 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 CD63P08962 238 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 SPARCP09486 303 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 JMJD7P0C870 316 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 FMODQ06828 376 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 MEP1BQ16820 701 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 TMEM81Q6P7N7 255 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 TMEM156Q8N614 296 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 DRAXINQ8NBI3 349 aaPredicted RBP16.46■□□□□ 0.23
CCDC43-201ENST00000315286 OR5AK2Q8NH90 309 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 NSMAFQ92636 917 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 UBL7Q96S82 380 aaPredicted RBP16.46■□□□□ 0.23
CCDC43-201ENST00000315286 ZPBPQ9BS86 351 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 ANGPTL4Q9BY76 406 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 B3GAT1Q9P2W7 334 aa16.46■□□□□ 0.23
CCDC43-201ENST00000315286 AK6Q9Y3D8 172 aaKnown RBP16.46■□□□□ 0.23
CCDC43-201ENST00000315286 NPIPB13A6NJU9 1138 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 NOTOA8MTQ0 251 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 NPIPB4C9JG80 1138 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 SRMP19623 302 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 ADAM8P78325 824 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 MRPL28Q13084 256 aaKnown RBP16.46■□□□□ 0.22
CCDC43-201ENST00000315286 LRRN1Q6UXK5 716 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 NRARPQ7Z6K4 114 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 SAMD12Q8N8I0 201 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 OR2G2Q8NGZ5 317 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 HAVCR2Q8TDQ0 301 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 PHYHIPQ92561 330 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 OR5B2Q96R09 309 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 KCNK17Q96T54 332 aa16.46■□□□□ 0.22
CCDC43-201ENST00000315286 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms