RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF195O14628 629 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GOSR2O14653 212 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 NCR1O76036 304 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 DEFA4P12838 97 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 PTGS2P35354 604 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 CHDHQ8NE62 594 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 NICN1Q9BSH3 213 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GALNT9Q9HCQ5 603 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 CLDN24A6NM45 220 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 CNIH1O95406 144 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 ACVR1Q04771 509 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 CNIH2Q6PI25 160 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 NARFLQ9H6Q4 476 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RANBP3Q9H6Z4 567 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 ZNF732B4DXR9 585 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 HPGDSO60760 199 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 C21orf33P30042 268 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 ZNF468Q5VIY5 522 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 AADACL3Q5VUY0 350 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GNB4Q9HAV0 340 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GCM1Q9NP62 436 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 ASB1Q9Y576 335 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 HMGN4O00479 90 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 EIF4EP06730 217 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 MEOX1P50221 254 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 GRB2P62993 217 aaKnown RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 TEKQ02763 1124 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.35□□□□□ -0.43
RFFL-201ENST00000315249 ZNF454Q8N9F8 522 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 FBXO17Q96EF6 278 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 FAM173AQ9BQD7 235 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 TUBB1Q9H4B7 451 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 TMEM38AQ9H6F2 299 aa12.35□□□□□ -0.43
RFFL-201ENST00000315249 RGPD3A6NKT7 1758 aaPredicted RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 SPTBP11277 2137 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 DEGS1O15121 323 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TEAD1P28347 426 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 BLVRBP30043 206 aaPredicted RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 SLC6A12P48065 614 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 ZNF616Q08AN1 781 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 NKAIN4Q8IVV8 208 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 GABRG3Q99928 467 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TMEM59Q9BXS4 323 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SDHAF2Q9NX18 166 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TET1Q8NFU7 2136 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 CDHR4A6H8M9 788 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SYT5O00445 386 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 GFRA3O60609 400 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 APEHP13798 732 aaKnown RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 GM2AP17900 193 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TBXA2RP21731 343 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 ARR3P36575 388 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 B4GALNT1Q00973 533 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SPACA9Q96E40 222 aaPredicted RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 GIMAP5Q96F15 307 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 PTTG3PQ9NZH4 202 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 FAM96BQ9Y3D0 163 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SHISA8B8ZZ34 492 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 PIPP12273 146 aaPredicted RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 FABP6P51161 128 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SAXO2Q658L1 398 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 PWWP2BQ6NUJ5 590 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 KIF18BQ86Y91 864 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SECTM1Q8WVN6 248 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SNX18Q96RF0 628 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 CAV3P56539 151 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 ZMAT1Q5H9K5 638 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SFRP5Q5T4F7 317 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 RETREG3Q86VR2 466 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 APOBEC4Q8WW27 367 aaKnown RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 ZNF583Q96ND8 569 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 VN1R1Q9GZP7 353 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 LAT2Q9GZY6 243 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 MRPS28Q9Y2Q9 187 aaKnown RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 FZD6O60353 706 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 CLDN12P56749 244 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TBRG1Q3YBR2 411 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 BCDIN3DQ7Z5W3 292 aaKnown RBP12.34□□□□□ -0.43
RFFL-201ENST00000315249 OR10G3Q8NGC4 313 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TFAP2CQ92754 450 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 FAM122AQ96E09 287 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 TECTBQ96PL2 329 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SPIN2AQ99865 258 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 SPIN2BQ9BPZ2 258 aa12.34□□□□□ -0.43
RFFL-201ENST00000315249 OR6C65A6NJZ3 312 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 TFPTP0C1Z6 253 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 IL3RAP26951 378 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 STPG1Q5TH74 334 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 CYHR1Q6ZMK1 362 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 ABCA7Q8IZY2 2146 aa12.33□□□□□ -0.43
RFFL-201ENST00000315249 NDRG4Q9ULP0 352 aaKnown RBP12.33□□□□□ -0.43
RFFL-201ENST00000315249 ARFGEF1Q9Y6D6 1849 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 VAMP5O95183 116 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 CALCBP10092 127 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ITGAMP11215 1152 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 BSGP35613 385 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 PPP1CAP62136 330 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 FXNQ16595 210 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms