RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 NOS3P29474 1203 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 LIMS1P48059 325 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 ARHGDIAP52565 204 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 ERVK-25P63136 954 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 GSG1Q2KHT4 349 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 SLC36A2Q495M3 483 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF672Q499Z4 452 aaPredicted RBP17.33■□□□□ 0.36
VEGFB-201ENST00000309422 PHYHD1Q5SRE7 291 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 THEM4Q5T1C6 240 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 ARMC4Q5T2S8 1044 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 C1orf146Q5VVC0 180 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 MCHR2Q969V1 340 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 TSPAN32Q96QS1 320 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 CADM1Q9BY67 442 aaKnown RBP17.33■□□□□ 0.36
VEGFB-201ENST00000309422 LRMDAQ9H2I8 198 aa17.33■□□□□ 0.36
VEGFB-201ENST00000309422 DENND2DQ9H6A0 471 aaPredicted RBP17.33■□□□□ 0.36
VEGFB-201ENST00000309422 ABCA12Q86UK0 2595 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ARHGEF9O43307 516 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 NPR2P20594 1047 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 SDHAP31040 664 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ART1P52961 327 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TUBA1BP68363 451 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TUBA4AP68366 448 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TSPAN31Q12999 210 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 KRR1Q13601 381 aaKnown RBP17.32■□□□□ 0.36
VEGFB-201ENST00000309422 C3orf36Q3SXR2 165 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 NRN1LQ496H8 165 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TMEM53Q6P2H8 277 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 PGM2L1Q6PCE3 622 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 NHLRC1Q6VVB1 395 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 DPY19L2P2Q6ZN68 376 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TUBA1AQ71U36 451 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ADCK1Q86TW2 530 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ARIH2OSQ8N7S6 290 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF611Q8N823 705 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 FAM169BQ8N8A8 192 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 IL17RDQ8NFM7 739 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 RNF121Q9H920 327 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 TMEM38BQ9NVV0 291 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 BEX4Q9NWD9 120 aaPredicted RBP17.32■□□□□ 0.36
VEGFB-201ENST00000309422 SLC7A8Q9UHI5 535 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF346Q9UL40 294 aaKnown RBP17.32■□□□□ 0.36
VEGFB-201ENST00000309422 SIGLEC7Q9Y286 467 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 U3KQV3 271 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 CACNA1DQ01668 2161 aa17.32■□□□□ 0.36
VEGFB-201ENST00000309422 VSTM5A8MXK1 200 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 AHCYL1O43865 530 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 SMPD2O60906 423 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 TMCC2O75069 709 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 ATE1O95260 518 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 BMP4P12644 408 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 CBR1P16152 277 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 GSTM3P21266 225 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 LOXP28300 417 aaPredicted RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 IDH3GP51553 393 aaPredicted RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 IST1P53990 364 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 MYBPC1Q00872 1141 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 IQCCQ4KMZ1 466 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 DNM1P34Q6PK57 102 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 SEZ6L2Q6UXD5 910 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF627Q7L945 461 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 SLC16A14Q7RTX9 510 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 JAZF1Q86VZ6 243 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 ADGRG5Q8IZF4 528 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 CANT1Q8WVQ1 401 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 NSMAFQ92636 917 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 HDAC2Q92769 488 aaKnown RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 GTPBP3Q969Y2 492 aaKnown RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF837Q96EG3 531 aaPredicted RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 GPX7Q96SL4 187 aaPredicted RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 IFT27Q9BW83 186 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 CCNB1IP1Q9NPC3 277 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 CISD1Q9NZ45 108 aaKnown RBP17.31■□□□□ 0.36
VEGFB-201ENST00000309422 ATP23Q9Y6H3 246 aa17.31■□□□□ 0.36
VEGFB-201ENST00000309422 FBN2P35556 2912 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 TEX13CA0A0J9YWL9 993 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 PLAUP00749 431 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 PTDSS1P48651 473 aaKnown RBP17.3■□□□□ 0.36
VEGFB-201ENST00000309422 RUNX1T1Q06455 604 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 DEFB113Q30KQ7 82 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 C10orf128Q5T292 105 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 C1orf94Q6P1W5 598 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 PGBD2Q6P3X8 592 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 ZER1Q7Z7L7 766 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 MDP1Q86V88 176 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 SLC22A24Q8N4F4 322 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 AQP11Q8NBQ7 271 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 MBD6Q96DN6 1003 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 KCNK17Q96T54 332 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 FUZQ9BT04 418 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 MRPL13Q9BYD1 178 aaKnown RBP17.3■□□□□ 0.36
VEGFB-201ENST00000309422 OR52D1Q9H346 318 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 LIME1Q9H400 295 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 ZNF556Q9HAH1 456 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 ADAM18Q9Y3Q7 739 aa17.3■□□□□ 0.36
VEGFB-201ENST00000309422 A0A1W2PPL8 197 aa17.29■□□□□ 0.36
VEGFB-201ENST00000309422 A0A1W2PPR1 153 aa17.29■□□□□ 0.36
VEGFB-201ENST00000309422 PTHP01270 115 aa17.29■□□□□ 0.36
VEGFB-201ENST00000309422 HLA-HP01893 362 aa17.29■□□□□ 0.36
VEGFB-201ENST00000309422 HMGA2P52926 109 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms