RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CPNE4Q96A23 557 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CREB3L1Q96BA8 519 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 RNF170Q96K19 258 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SARGQ9BW04 601 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PCM1Q15154 2024 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 KNTC1P50748 2209 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TNFSF12O43508 249 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SELENOFO60613 162 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 DNAJB6O75190 326 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CD82P27701 267 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 KIR2DL1P43626 348 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 VEGFCP49767 419 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 GNRHR2Q96P88 292 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 KCNJ16Q9NPI9 418 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SLC5A6Q9Y289 635 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 M0R036 132 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 BCAS1O75363 584 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CNIH1O95406 144 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 UBCP0CG48 685 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TMBIM6P55061 237 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PPP1CAP62136 330 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 MAB21L1Q13394 359 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PMS2CLQ68D20 193 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 C19orf48Q6RUI8 117 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CYHR1Q6ZMK1 362 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PIGTQ969N2 578 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ESRP2Q9H6T0 727 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 MGAT4CQ9UBM8 478 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CEBPZOSA8MTT3 80 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 THBS1P07996 1170 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ITGAMP11215 1152 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 UCNP55089 124 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 STEAP3Q658P3 488 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 FGGYQ96C11 551 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 SNX18Q96RF0 628 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 AMBRA1Q9C0C7 1298 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 ASCC3Q8N3C0 2202 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 CAPNS1P04632 268 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 OR2T7P0C7T2 308 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 OR2T27Q8NH04 317 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TFAP2CQ92754 450 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TEX37Q96LM6 180 aa9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 TIMM8BQ9Y5J9 83 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-201ENST00000307142 PRICKLE3O43900 615 aaPredicted RBP9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 S100A6P06703 90 aa9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 ARSGQ96EG1 525 aa9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 NKX3-1Q99801 234 aaPredicted RBP9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 NUDT9Q9BW91 350 aa9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 TMEM9Q9P0T7 183 aa9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 MBD1Q9UIS9 605 aaPredicted RBP9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 NTNG1Q9Y2I2 539 aa9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 LSM5Q9Y4Y9 91 aaKnown RBP9.77□□□□□ -0.84
SYNPO2-201ENST00000307142 A0A1W2PQL4 384 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 TRIM64CA6NLI5 447 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC34A2O95436 690 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SLC2A1P11166 492 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF92Q03936 586 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 DUSP8Q13202 625 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF554Q86TJ5 538 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 OR13C9Q8NGT0 318 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 LOXL4Q96JB6 756 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 POLE4Q9NR33 117 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 AGAP5A6NIR3 686 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SHISA8B8ZZ34 492 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 P2RX6O15547 441 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 PRKACAP17612 351 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF83P51522 516 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 F2RL1P55085 397 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 RGS7BPQ6MZT1 257 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 MINDY2Q8NBR6 621 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SEMA6DQ8NFY4 1073 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 OR10X1Q8NGY0 326 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 ZNF431Q8TF32 576 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 Q96M85 177 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SDHAF2Q9NX18 166 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 GFOD1Q9NXC2 390 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 EHFQ9NZC4 300 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 LGI1O95970 557 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 IFNA2P01563 188 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SNRPD2P62316 118 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 GNB1P62873 340 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 CRMP1Q14194 572 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 CISD2Q8N5K1 135 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 FGF11Q92914 225 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 BARHL1Q9BZE3 327 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 BABAM2Q9NXR7 383 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 TCFL5Q9UL49 500 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 RNF212BA8MTL3 300 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 EFSO43281 561 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 ARF1P84077 181 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 LTBQ06643 244 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 MEP1BQ16820 701 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 CD163Q86VB7 1156 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 RABL2AQ9UBK7 228 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 OR52A1Q9UKL2 312 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 RABL2BQ9UNT1 228 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 RAB27BO00194 218 aa9.77□□□□□ -0.85
SYNPO2-201ENST00000307142 SPINT2O43291 252 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms