RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 RAI1Q7Z5J4 1906 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TEX13CA0A0J9YWL9 993 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FAM221AA4D161 298 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PTP4A3O75365 173 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 UBL3O95164 117 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PPP1R3DO95685 299 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GASTP01350 101 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 B4GALT1P15291 398 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FASP25445 335 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GUCA1AP43080 201 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RUNX1T1Q06455 604 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GABPB1Q06547 395 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FHL1Q13642 323 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CCNIQ14094 377 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RFX4Q33E94 735 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 THEM4Q5T1C6 240 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NCMAPQ5T1S8 102 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 THSD4Q6ZMP0 1018 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ADCK1Q86TW2 530 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CDC20BQ86Y33 519 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 WDFY1Q8IWB7 410 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C10orf67Q8IYJ2 551 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TEX47Q8TBZ9 253 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 BCL2L2Q92843 193 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MCHR2Q969V1 340 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 UTP4Q969X6 686 aaKnown RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLCO4A1Q96BD0 722 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RASD2Q96D21 266 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF837Q96EG3 531 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 BOD1Q96IK1 185 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LURAP1Q96LR2 239 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SAMD8Q96LT4 415 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 Q96M85 177 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ERMAPQ96PL5 475 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 GPA33Q99795 319 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 BDH2Q9BUT1 245 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DGCR6LQ9BY27 220 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MRPL13Q9BYD1 178 aaKnown RBP9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KCNN2Q9H2S1 579 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SMURF2Q9HAU4 748 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NRIP3Q9NQ35 241 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ARMC1Q9NVT9 282 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RNF115Q9Y4L5 304 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CDH10Q9Y6N8 788 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DSCAMO60469 2012 aa9.63□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 H3BN98 237 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 H7C1C5 153 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SOCS2O14508 198 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SIAH2O43255 324 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 AHCYL1O43865 530 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SLC2A10O95528 541 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RAB36O95755 333 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 RENP00797 406 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CD79AP11912 226 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 APEHP13798 732 aaKnown RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF26P17031 533 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PTAFRP25105 342 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IST1P53990 364 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 LCN6P62502 163 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TUBA1BP68363 451 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TUBA4AP68366 448 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FMODQ06828 376 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 BSPH1Q075Z2 132 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 KPNB1Q14974 876 aaKnown RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 HIST3H3Q16695 136 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 MESTQ5EB52 335 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C10orf128Q5T292 105 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF770Q6IQ21 691 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DNM1P34Q6PK57 102 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF704Q6ZNC4 412 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 TUBA1AQ71U36 451 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 FAM122BQ7Z309 247 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DEPDC4Q8N2C3 294 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PIAS4Q8N2W9 510 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 CLDN22Q8N7P3 220 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 WDR31Q8NA23 367 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ATG16L2Q8NAA4 619 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NSMAFQ92636 917 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 C1QTNF6Q9BXI9 259 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NELFAQ9H3P2 528 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 DENND2DQ9H6A0 471 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 EGLN3Q9H6Z9 239 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 UBTD1Q9HAC8 227 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 NPAP1Q9NZP6 1156 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 POU2F3Q9UKI9 436 aa9.62□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ASH1LQ9NR48 2969 aaKnown RBP9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 A0A1W2PPL8 197 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 PRSS37A4D1T9 235 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ABCD4O14678 606 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IMPA2O14732 288 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 IDH3BO43837 385 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 SOX14O95416 240 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 OR8G3PP0DMU2 310 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ANXA8P13928 327 aa9.61□□□□□ -0.87
CSPG4P2Y-201ENST00000306853 ZNF23P17027 643 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms