RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CASP3P42574 277 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 BHLHA9Q7RTU4 235 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 ADGRE4PQ86SQ3 457 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 SLCO5A1Q9H2Y9 848 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 GALNT9Q9HCQ5 603 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 CHRNA9Q9UGM1 479 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 TIMM8BQ9Y5J9 83 aaPredicted RBP14.63□□□□□ -0.07
USP42-201ENST00000306177 LOC100289279A0A1B0GTE1 492 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 A0A1W2PPC4 97 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 BET1O15155 118 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 PRPH2P23942 346 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 ZNF620Q6ZNG0 422 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 BCL2L10Q9HD36 194 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 KIF25Q9UIL4 384 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 COA3Q9Y2R0 106 aaPredicted RBP14.63□□□□□ -0.07
USP42-201ENST00000306177 UGT2A1Q9Y4X1 527 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 CEBPZOSA8MTT3 80 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 AKR7A3O95154 331 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 TSPAN12O95859 305 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 CEACAM5P06731 702 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 MFGE8Q08431 387 aaPredicted RBP14.63□□□□□ -0.07
USP42-201ENST00000306177 GALEQ14376 348 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 OCSTAMPQ9BR26 566 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 ANKRD10Q9NXR5 420 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 GPR55Q9Y2T6 319 aaPredicted RBP14.63□□□□□ -0.07
USP42-201ENST00000306177 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
USP42-201ENST00000306177 IDSB3KWA1 339 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 GLSO94925 669 aaPredicted RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 IFNA10P01566 189 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 EVI2BP34910 448 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 PPICP45877 212 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 MRPL19P49406 292 aaKnown RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 CATR1Q13166 79 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 GLYATL3Q5SZD4 288 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 OR4D6Q8NGJ1 314 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 OR11L1Q8NGX0 322 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 IFI44Q8TCB0 444 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 FCRL1Q96LA6 429 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 PRMT8Q9NR22 394 aaPredicted RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 C1orf123Q9NWV4 160 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 MRPS2Q9Y399 296 aaKnown RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 TCRBV5S2A0A599 114 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 PRAMEF4O60810 478 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 ARRB2P32121 409 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 ZNF136P52737 540 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 POU4F3Q15319 338 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SLCO4A1Q96BD0 722 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SGK3Q96BR1 496 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 LRFN5Q96NI6 719 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SDHAF2Q9NX18 166 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 RAB22AQ9UL26 194 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 OR51D1Q8NGF3 324 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 A0A087WV62 115 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 M0R082 166 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 ETHE1O95571 254 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 ATP1B1P05026 303 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 TEKQ02763 1124 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 C6orf15Q6UXA7 325 aaPredicted RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 MVB12AQ96EY5 273 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 CMC2Q9NRP2 79 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 A0A0D9SG52 128 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SULT1B1O43704 296 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SMIM18P0DKX4 95 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 GLYR1Q49A26 553 aaPredicted RBP14.62□□□□□ -0.07
USP42-201ENST00000306177 STEAP1BQ6NZ63 245 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 RFPL4BQ6ZWI9 263 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 SIAH3Q8IW03 269 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 NMNAT2Q9BZQ4 307 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 PLCXD1Q9NUJ7 323 aa14.62□□□□□ -0.07
USP42-201ENST00000306177 A0A1W2PS29 197 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 SHOXO15266 292 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 CD79BP40259 229 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 MAP2K6P52564 334 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 MAML2Q8IZL2 1156 aaPredicted RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 PAQR8Q8TEZ7 354 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 NKX3-1Q99801 234 aaPredicted RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 IKZF5Q9H5V7 419 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 ZAR1LA6NP61 321 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 TCRBP04435 133 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 AADACL3Q5VUY0 350 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 LILRA6Q6PI73 481 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 MORN4Q8NDC4 146 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 OR2A1Q8NGT9 310 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 MSI2Q96DH6 328 aaKnown RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 FOXQ1Q9C009 403 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 SEMA4CQ9C0C4 833 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 LAT2Q9GZY6 243 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 C11orf54Q9H0W9 315 aaPredicted RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 ATPIF1Q9UII2 106 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 ARID1BQ8NFD5 2236 aaPredicted RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 SULT1C2O00338 296 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 FCMRO60667 390 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 RPS19P39019 145 aaKnown RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 ETV1P50549 477 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 CTU2Q2VPK5 515 aaKnown RBP14.61□□□□□ -0.07
USP42-201ENST00000306177 VWA2Q5GFL6 755 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 EMC4Q5J8M3 183 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 PLPP7Q8NBV4 271 aa14.61□□□□□ -0.07
USP42-201ENST00000306177 STT3BQ8TCJ2 826 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms