RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 TSC22D2O75157 780 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CLPXO76031 633 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 RAB3BP20337 219 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CD40LGP29965 261 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 RAB14P61106 215 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 OR8B8Q15620 311 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 NXNL2Q5VZ03 156 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 B3GLCTQ6Y288 498 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM200AQ86VY9 491 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 PTOV1Q86YD1 416 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TOMM5Q8N4H5 51 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM151AQ8N4L1 468 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF321PQ8N8H1 164 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ASCC1Q8N9N2 400 aaKnown RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TM4SF19Q96DZ7 209 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF764Q96H86 408 aaPredicted RBP8.39□□□□□ -1.07
PTPRE-202ENST00000306042 POTEKPQ9BYX7 375 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 TXNIPQ9H3M7 391 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ASH2LQ9UBL3 628 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 B3GNT3Q9Y2A9 372 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 J3QRK9 145 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CRYBA1P05813 215 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SELEP16581 610 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 PRKACBP22694 351 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 MYF6P23409 242 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 CEACAM16Q2WEN9 425 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ATP1A1-AS1Q5TC04 95 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 BHLHE23Q8NDY6 225 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 OR51T1Q8NGJ9 327 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 VSTM2LQ96N03 204 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF700Q9H0M5 742 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SLCO5A1Q9H2Y9 848 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 SIRT5Q9NXA8 310 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF222Q9UK12 451 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 STUB1Q9UNE7 303 aa8.39□□□□□ -1.07
PTPRE-202ENST00000306042 THADAQ6YHU6 1953 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 LOC100509620A0A075B734 347 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 FAM172BPA6NC97 362 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF850A8MQ14 1090 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 GLCEO94923 617 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 B4GALT1P15291 398 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 GABRR1P24046 479 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 GPR50Q13585 617 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 MEP1BQ16820 701 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 FAM219BQ5XKK7 198 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 Q6ZPB1 254 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 BEND4Q6ZU67 534 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF582Q96NG8 517 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 QPCTLQ9NXS2 382 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 B3GAT1Q9P2W7 334 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ENPP5Q9UJA9 477 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 CACNA1BQ00975 2339 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 A0A087WUJ7 227 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 OR2M5A3KFT3 312 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 LRRN3E7EW58 273 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 CYB5BO43169 146 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 DIRAS3O95661 229 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 SLC2A2P11168 524 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 RAD52P43351 418 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 DAPP51397 102 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 BCAP31P51572 246 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF91Q05481 1191 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 KRTCAP3Q53RY4 240 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 SLC35D3Q5M8T2 416 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 TMEM69Q5SWH9 247 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF584Q8IVC4 421 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 OR6V1Q8N148 313 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 NIPSNAP1Q9BPW8 284 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ZNF639Q9UID6 485 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 RAXQ9Y2V3 346 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 C5orf49A4QMS7 147 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 HRKO00198 91 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 OPRM1P35372 400 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 SRP14P37108 136 aaKnown RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ARSKQ6UWY0 536 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 NPSR1Q6W5P4 371 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ADAMTS14Q8WXS8 1223 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 TGIF2Q9GZN2 237 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 TP63Q9H3D4 680 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 ENY2Q9NPA8 101 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 C14orf119Q9NWQ9 140 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 BABAM2Q9NXR7 383 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 NOS1APO75052 506 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 MTCP1P56278 107 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 WNT3P56703 355 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 PHC1P78364 1004 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 KCNJ8Q15842 424 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 NADK2Q4G0N4 442 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 MRPL41Q8IXM3 137 aaKnown RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 LRRC56Q8IYG6 542 aaPredicted RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 FBXL14Q8N1E6 418 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 SNRNP27Q8WVK2 155 aaKnown RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 LIPHQ8WWY8 451 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 GLRX2Q9NS18 164 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
PTPRE-202ENST00000306042 KCNN3Q9UGI6 736 aa8.38□□□□□ -1.07
PTPRE-202ENST00000306042 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 DISC1C4P0D8 188 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 AMY2BP19961 511 aa8.37□□□□□ -1.07
PTPRE-202ENST00000306042 LAP3P28838 519 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms