RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SOX2P48431 317 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 GPR143P51810 404 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 PGGHGQ32M88 737 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 CD200R1LQ6Q8B3 271 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 TMEM99Q8N816 258 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 OR11G2Q8NGC1 345 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 C15orf40Q8WUR7 153 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 RBM18Q96H35 190 aaKnown RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 ZNF75AQ96N20 296 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 EPHA6Q9UF33 1036 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 KLF2Q9Y5W3 355 aaPredicted RBP9.97□□□□□ -0.81
LSM3-201ENST00000306024 RP1P56715 2156 aa9.97□□□□□ -0.81
LSM3-201ENST00000306024 SCN3AQ9NY46 2000 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 A0A0A6YYC8 382 aaPredicted RBP9.96□□□□□ -0.81
LSM3-201ENST00000306024 GGT3PA6NGU5 568 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 I3L1I5 382 aaPredicted RBP9.96□□□□□ -0.81
LSM3-201ENST00000306024 GKN3PP0CG01 181 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 SP9P0CG40 484 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 HTR1FP30939 366 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.81
LSM3-201ENST00000306024 LASP1Q14847 261 aaKnown RBP9.96□□□□□ -0.81
LSM3-201ENST00000306024 ZNF124Q15973 351 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 TCEAL6Q6IPX3 200 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 SEZ6L2Q6UXD5 910 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 BEND4Q6ZU67 534 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 OR4N5Q8IXE1 308 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 CCDC116Q8IYX3 515 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 CYB561A3Q8NBI2 242 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 OR6T1Q8NGN1 323 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 TCTN2Q96GX1 697 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 CXorf36Q9H7Y0 433 aa9.96□□□□□ -0.81
LSM3-201ENST00000306024 LILRA5A6NI73 299 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 EEF1E1-BLOC1S5C9J1V9 151 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 SPI1P17947 270 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 HOXA6P31267 233 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 MPIP34949 423 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 FASLGP48023 281 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 IKZF1Q13422 519 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 KLF9Q13886 244 aaPredicted RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 OR2B11Q5JQS5 317 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 ZNF626Q68DY1 528 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 UQCC3Q6UW78 93 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 SLC29A4Q7RTT9 530 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 STEAP2Q8NFT2 490 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 OR6K3Q8NGY3 331 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 CA5BP1Q8WTZ4 195 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 PNPLA2Q96AD5 504 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 TMPRSS13Q9BYE2 586 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 RGCCQ9H4X1 137 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 NEUROD4Q9HD90 331 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 PILRBQ9UKJ0 227 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 DENND4AQ7Z401 1863 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 A0A1B0GTQ1 180 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 ZNF432O94892 652 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 NFYBP25208 207 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 ITGA3P26006 1051 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 NAA10P41227 235 aaPredicted RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 RAB5CP51148 216 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 OR12D2P58182 307 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 SHC2P98077 582 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 TSPAN31Q12999 210 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 ARHGAP40Q5TG30 622 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 FCRLBQ6BAA4 426 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 ZNF770Q6IQ21 691 aaPredicted RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 SKA3Q8IX90 412 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 BAHD1Q8TBE0 780 aaPredicted RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 PRRC1Q96M27 445 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 MEPEQ9NQ76 525 aaPredicted RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 HINT3Q9NQE9 182 aaKnown RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 DCAF16Q9NXF7 216 aa9.96□□□□□ -0.82
LSM3-201ENST00000306024 FARSAQ9Y285 508 aaKnown RBP9.96□□□□□ -0.82
LSM3-201ENST00000306024 RDH16O75452 317 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 GP1BAP07359 652 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 FURINP09958 794 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CPN1P15169 458 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 HOXB9P17482 250 aaPredicted RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 PRPH2P23942 346 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 CD34P28906 385 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ADAM8P78325 824 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 HYAL4Q2M3T9 481 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 FIGNL1Q6PIW4 674 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 RNF165Q6ZSG1 346 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 DPPA2Q7Z7J5 298 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 TMPRSS12Q86WS5 348 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ZNF561Q8N587 486 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 GPR32P1Q8NGA4 272 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 OR5P2Q8WZ92 322 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 DERL3Q96Q80 235 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 RSRP1Q9BUV0 290 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 ADAP2Q9NPF8 381 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 GPATCH2Q9NW75 528 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 RASL12Q9NYN1 266 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 PPP4R1LQ9P1A2 415 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 FAM186AA6NE01 2351 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 LRRK1Q38SD2 2015 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 SLC22A31A6NKX4 558 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 NUDT21O43809 227 aaKnown RBP9.95□□□□□ -0.82
LSM3-201ENST00000306024 KCNAB1Q14722 419 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 C1orf189Q5VU69 101 aa9.95□□□□□ -0.82
LSM3-201ENST00000306024 GUSBP11Q6P575 273 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms