RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 IGLV3-27P01718 113 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MTCP1P56278 107 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 OR10A3P58181 314 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 PCBD1P61457 104 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TMEM52BQ4KMG9 183 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MOB3CQ70IA8 216 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 FGGYQ96C11 551 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SMIM19Q96E16 107 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TCTN2Q96GX1 697 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CSF3RQ99062 836 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 HDAC8Q9BY41 377 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CREBZFQ9NS37 354 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 CDC14CA4D256 554 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MAN2B1O00754 1011 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 JMJD7P0C870 316 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 OMGP23515 440 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SERPINF1P36955 418 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TAGLN2P37802 199 aaKnown RBP11.82□□□□□ -0.52
COL3A1-201ENST00000304636 OR1D4P47884 311 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 DUSP5Q16690 384 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 ZFP82Q8N141 532 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 GABRG1Q8N1C3 465 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 STRADBQ9C0K7 418 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 GAREM1Q9H706 876 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 PLAC1Q9HBJ0 212 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TRBV5-4A0A0C4DH59 114 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 IFITM5A6NNB3 132 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MAOBP27338 520 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 SOX18P35713 384 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 FCRL6Q6DN72 434 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MED25Q71SY5 747 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 WDR5BQ86VZ2 330 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 MMP21Q8N119 569 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 Q96M85 177 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 FLVCR2Q9UPI3 526 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 PCDHGA1Q9Y5H4 931 aa11.82□□□□□ -0.52
COL3A1-201ENST00000304636 PCYT1BQ9Y5K3 369 aaPredicted RBP11.82□□□□□ -0.52
COL3A1-201ENST00000304636 TMED7-TICAM2A0A0A6YYA0 188 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 UTS2O95399 124 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DDAH2O95865 285 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 C1QAP02745 245 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MGMTP16455 207 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 TRHRP34981 398 aaPredicted RBP11.81□□□□□ -0.52
COL3A1-201ENST00000304636 NPY4RP50391 375 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MMP15P51511 669 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MRPS34P82930 218 aaKnown RBP11.81□□□□□ -0.52
COL3A1-201ENST00000304636 YOD1Q5VVQ6 348 aaPredicted RBP11.81□□□□□ -0.52
COL3A1-201ENST00000304636 OPN5Q6U736 354 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 PRSS35Q8N3Z0 413 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MS4A6EQ96DS6 147 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 RAB9BQ9NP90 201 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 CSAG2Q9Y5P2 127 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 CCDC163A0A0D9SF12 145 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 OR5H14A6NHG9 310 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DRD1P21728 446 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 APLNRP35414 380 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 KIAA0141Q14154 515 aaPredicted RBP11.81□□□□□ -0.52
COL3A1-201ENST00000304636 NPSR1Q6W5P4 371 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SLC35A4Q96G79 324 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SDSLQ96GA7 329 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DCBLD2Q96PD2 775 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SDF2Q99470 211 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SEMA4CQ9C0C4 833 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 CDH20Q9HBT6 801 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 ZNF44P15621 663 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 PCMT1P22061 227 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DIO1P49895 249 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 EPHA5P54756 1037 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 HBG1P69891 147 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 HBG2P69892 147 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DUSP8Q13202 625 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 DOC2BQ14184 412 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MANEAQ5SRI9 462 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 IL1F10Q8WWZ1 152 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SLC6A18Q96N87 628 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SLC46A1Q96NT5 459 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 NUDT22Q9BRQ3 303 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 LYRM4Q9HD34 91 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 TAS2R5Q9NYW4 299 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 HCRTR1O43613 425 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 S100A8P05109 93 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 MSR1P21757 451 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 ACHEP22303 614 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 LIM2P55344 173 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 ZP2Q05996 745 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 C12orf73Q69YU5 71 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 HSD17B11Q8NBQ5 300 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 LURAP1Q96LR2 239 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 SGPP1Q9BX95 441 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 ULBP2Q9BZM5 246 aa11.81□□□□□ -0.52
COL3A1-201ENST00000304636 RNF212BA8MTL3 300 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 MT-ATP6P00846 226 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 FOLR1P15328 257 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 ZP3P21754 424 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 CDK5R1Q15078 307 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 METRNLQ641Q3 311 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
COL3A1-201ENST00000304636 SPNS2Q8IVW8 549 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms