RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 MRPS18BQ9Y676 258 aaKnown RBP7.15□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PR48 441 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 MT-CO2P00403 227 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 ADH6P28332 368 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 CA13Q8N1Q1 262 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 RAB39BQ96DA2 213 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 GIMAP5Q96F15 307 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 TEX37Q96LM6 180 aa7.15□□□□□ -1.26
SCN9A-201ENST00000303354 GABRPO00591 440 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 CCSO14618 274 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 SPRY1O43609 319 aaPredicted RBP7.15□□□□□ -1.27
SCN9A-201ENST00000303354 COX7A1P24310 79 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 PAX6P26367 422 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 RPS25P62851 125 aaKnown RBP7.15□□□□□ -1.27
SCN9A-201ENST00000303354 B3GNT8Q7Z7M8 397 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 FBXL6Q8N531 539 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 GGHQ92820 318 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 ZDHHC5Q9C0B5 715 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 KLF13Q9Y2Y9 288 aaPredicted RBP7.15□□□□□ -1.27
SCN9A-201ENST00000303354 FAM157AC9JC47 383 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 SLC34A2O95436 690 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 SERPINF1P36955 418 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 DCAF7P61962 342 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 YBX1P67809 324 aaKnown RBP7.15□□□□□ -1.27
SCN9A-201ENST00000303354 ABHD17CQ6PCB6 329 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 C12orf45Q8N5I9 185 aaPredicted RBP7.15□□□□□ -1.27
SCN9A-201ENST00000303354 STEAP2Q8NFT2 490 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 MAB21L2Q9Y586 359 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 C17orf113A0A1B0GUU1 675 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 B4GALT1P15291 398 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 ELP4Q96EB1 424 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 MALSU1Q96EH3 234 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 RPS10P5Q9NQ39 176 aa7.15□□□□□ -1.27
SCN9A-201ENST00000303354 MASP2O00187 686 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CYB5BO43169 146 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CRYAAP02489 173 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 PATE4P0C8F1 98 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 AKAIN1P0CW23 69 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 RRASP10301 218 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 YOD1Q5VVQ6 348 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SLC48A1Q6P1K1 146 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 BRICD5Q6PL45 260 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 GTPBP8Q8N3Z3 284 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR51A4Q8NGJ6 313 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR51A2Q8NGJ7 313 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR6T1Q8NGN1 323 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 THAP7Q9BT49 309 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 NIPAL2Q9H841 368 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CNOT11Q9UKZ1 510 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 METTL12A8MUP2 240 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 PLRG1O43660 514 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR8U8P0C7N1 319 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 GIFP27352 417 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SOX8P57073 446 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 AGBL4Q5VU57 503 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 ADGRG5Q8IZF4 528 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR10AD1Q8NGE0 317 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 RAB3CQ96E17 227 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR2B2Q9GZK3 357 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 DCAF13Q9NV06 445 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 KIAA1456Q9P272 454 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 NPTNQ9Y639 398 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 TFP02787 698 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SPNS3Q6ZMD2 512 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR7G2Q8NG99 324 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CRYGNQ8WXF5 182 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 TSPAN11A1L157 253 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 GABARAPH6UMI1 98 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 HAX1O00165 279 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SMAD7O15105 426 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 GABARAPO95166 117 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CRYZL1O95825 349 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 APELAP0DMC3 54 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 HOXD11P31277 338 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 PLAC9Q5JTB6 97 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 ANGPTL5Q86XS5 388 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 FNDC9Q8TBE3 224 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CSF3RQ99062 836 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 NMNAT2Q9BZQ4 307 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 EGLN1Q9GZT9 426 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SSUH2Q9Y2M2 353 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 NUPL2O15504 423 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 DAPP51397 102 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 ELLP55199 621 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 MS4A6EQ96DS6 147 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SLC22A11Q9NSA0 550 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 TMEM30AQ9NV96 361 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 KCNG2Q9UJ96 466 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 OR52A1Q9UKL2 312 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 TRGV5A0A0B4J1U4 118 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 AQP7P3A6NL99 342 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SMLR1H3BR10 107 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 HOXC11O43248 304 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 PRKYO43930 277 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SNNO75324 88 aaPredicted RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 KCNK5O95279 499 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 CCL4P13236 92 aa7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SRP9P49458 86 aaKnown RBP7.14□□□□□ -1.27
SCN9A-201ENST00000303354 SORDQ00796 357 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms