RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PPP1R3CQ9UQK1 317 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SRMP19623 302 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HTR1FP30939 366 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EPHA5P54756 1037 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 Q499Y3 187 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NXNL2Q5VZ03 156 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ASTLQ6HA08 431 aaPredicted RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 B3GNT9Q6UX72 402 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51H1Q8NH63 302 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C8orf44Q96CB5 159 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 UHRF2Q96PU4 802 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KIF25Q9UIL4 384 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PPT2Q9UMR5 302 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF814B7Z6K7 855 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HRO43593 1189 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TPOP07202 933 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR8U8P0C7N1 319 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PDZD11Q5EBL8 140 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF75AQ96N20 296 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MKRN2Q9H000 416 aaKnown RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 C6orf106Q9H6K1 298 aaPredicted RBP12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GPR160Q9UJ42 338 aa12.49□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FITM1A5D6W6 292 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 AGAP14A8MT82 685 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GUSBP08236 651 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HLA-DOBP13765 273 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TGFBR1P36897 503 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RFC3P40938 356 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ADIRFQ15847 76 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GOT1L1Q8NHS2 421 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM3DQ96BQ1 224 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF576Q9H609 170 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HS3ST2Q9Y278 367 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PIPP12273 146 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MTHFD2P13995 350 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 AADACP22760 399 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LIPAP38571 399 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAAP20Q6NZ36 180 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF705AQ6ZN79 300 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HAVCR2Q8TDQ0 301 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 Q96M85 177 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TSTD3H0UI37 97 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZNF701M0R085 212 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PLPP1O14494 284 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MLF2Q15773 248 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC48A1Q6P1K1 146 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TRILQ7L0X0 811 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PLPP5Q8NEB5 264 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PHOSPHO2Q8TCD6 241 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 RAB39BQ96DA2 213 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ABHD6Q9BV23 337 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ADAM29Q9UKF5 820 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC5A10A0PJK1 596 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PAPLNO95428 1278 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NPPBP16860 134 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NDUFB7P17568 137 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MMP12P39900 470 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ETV1P50549 477 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 P2RX1P51575 399 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NLRP8Q86W28 1048 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ANGPTL5Q86XS5 388 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CMIPQ8IY22 773 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM109AQ8N4B1 249 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51A4Q8NGJ6 313 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR51A2Q8NGJ7 313 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 EDAQ92838 391 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SPACA5Q96QH8 159 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM221AA4D161 298 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CYB5BO43169 146 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DUSP5Q16690 384 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PLAC9Q5JTB6 97 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ANKRD34AQ69YU3 496 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC22A25Q6T423 547 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ADAMTSL4Q6UY14 1074 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 DPY19L2P2Q6ZN68 376 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 FAM185AQ8N0U4 392 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SVBPQ8N300 66 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 ZBP1Q9H171 429 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 MOKQ9UQ07 419 aa12.48□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PRAMEF25A6NGN4 478 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 TCRBP04435 133 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 HOXC13P31276 330 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 GABRA4P48169 554 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 NECAP1Q8NC96 275 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC35B4Q969S0 331 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 KDM3BQ7LBC6 1761 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A0A096LPE4 126 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 A0A1W2PPZ6 126 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SMIM15Q7Z3B0 74 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SLC30A7Q8NEW0 376 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 OR13C5Q8NGS8 318 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CCDC74AQ96AQ1 378 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 PKMYT1Q99640 499 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 SPHK1Q9NYA1 384 aa12.47□□□□□ -0.41
CHRFAM7A-201ENST00000299847 CHST2Q9Y4C5 530 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms