RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 VAMP1P23763 118 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 RPL4P36578 427 aaKnown RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 GPX4P36969 197 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 EEF1A1P68104 462 aaKnown RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 SLC22A6Q4U2R8 563 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ENPP7Q6UWV6 458 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 RANBP3LQ86VV4 465 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 FOXN4Q96NZ1 517 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 NECAB3Q96P71 396 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 FAM83CQ9BQN1 747 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ACTRT3Q9BYD9 372 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ATG5Q9H1Y0 275 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 SEMA6CQ9H3T2 930 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 KRCC1Q9NPI7 259 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 RPS10P5Q9NQ39 176 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 TMEM74BQ9NUR3 256 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 FRRS1LQ9P0K9 344 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 PLXNA2O75051 1894 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 A0A1W2PRU2 124 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 OLFM2O95897 454 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ITGA5P08648 1049 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 PRSS3P35030 304 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 PRKXP51817 358 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ACTA2P62736 377 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 ACTG2P63267 376 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 REEP5Q00765 189 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 RIPPLY1Q0D2K3 151 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 EIF2B1Q14232 305 aaKnown RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 C10orf91Q5T1B1 145 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 PARS2Q7L3T8 475 aaKnown RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 TMEFF1Q8IYR6 380 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 INO80EQ8NBZ0 244 aaPredicted RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 IP6K3Q96PC2 410 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 IL21Q9HBE4 155 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 RHOFQ9HBH0 211 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 RCC2Q9P258 522 aaKnown RBP12.26□□□□□ -0.45
SKA3-201ENST00000298260 MPDZO75970 2070 aa12.26□□□□□ -0.45
SKA3-201ENST00000298260 A0A1W2PPH5 198 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 FITM1A5D6W6 292 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 TVP23AA6NH52 213 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 MSGN1A6NI15 193 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 H7C1C5 153 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SNAPC5O75971 98 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CD8AP01732 235 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 S100A8P05109 93 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CD80P33681 288 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 GPR143P51810 404 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 LBX1P52954 281 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 LCN6P62502 163 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 MRPS10P82664 201 aaKnown RBP12.25□□□□□ -0.45
SKA3-201ENST00000298260 PPP1R1AQ13522 171 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 PON3Q15166 354 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ADAM5Q6NVV9 412 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 TMEM64Q6YI46 380 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 PLPP7Q8NBV4 271 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 OR5K2Q8NHB8 316 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ZBTB8AQ96BR9 441 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CYYR1Q96J86 154 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 AKR1E2Q96JD6 320 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 LMLNQ96KR4 655 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SDF2Q99470 211 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SLC6A7Q99884 636 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 MTHFD2LQ9H903 347 aaPredicted RBP12.25□□□□□ -0.45
SKA3-201ENST00000298260 PRDM7Q9NQW5 492 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SAGE1Q9NXZ1 904 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 FLRT3Q9NZU0 649 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ATXN7L1Q9ULK2 861 aaPredicted RBP12.25□□□□□ -0.45
SKA3-201ENST00000298260 TMED7Q9Y3B3 224 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 TBC1D3EA0A087X179 549 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 FGF16O43320 207 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ZNF208O43345 1280 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 PMS2P2O95744 297 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 PRF1P14222 555 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ACTR1AP61163 376 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SKP1P63208 163 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 AIMP2Q13155 320 aaKnown RBP12.25□□□□□ -0.45
SKA3-201ENST00000298260 SYS1Q8N2H4 156 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SEMA6DQ8NFY4 1073 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 C2orf15Q8WU43 125 aaKnown RBP12.25□□□□□ -0.45
SKA3-201ENST00000298260 DCUN1D4Q92564 292 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 MS4A6EQ96DS6 147 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 PIK3IP1Q96FE7 263 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ARL5BQ96KC2 179 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CMTM3Q96MX0 182 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 SEC11CQ9BY50 192 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CST11Q9H112 138 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 TMEM27Q9HBJ8 222 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 ASH2LQ9UBL3 628 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CES1P1Q9UKY3 287 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 VSIG4Q9Y279 399 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 CSAG2Q9Y5P2 127 aa12.25□□□□□ -0.45
SKA3-201ENST00000298260 A0A1B0GTI1 187 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 METTL21EPA6NDL7 271 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 GPR37O15354 613 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 YIF1AO95070 293 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 WNT11O96014 354 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 ARG1P05089 322 aa12.24□□□□□ -0.45
SKA3-201ENST00000298260 SERPINA5P05154 406 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms