RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 RNF113BQ8IZP6 322 aaKnown RBP14.19□□□□□ -0.14
UBAP1-201ENST00000297661 ZFP82Q8N141 532 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 OR14A16Q8NHC5 309 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 ZPLD1Q8TCW7 415 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 CMTM3Q96MX0 182 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 FOXQ1Q9C009 403 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 PRDM9Q9NQV7 894 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 DUSP22Q9NRW4 184 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 EPHA6Q9UF33 1036 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 ST6GALNAC2Q9UJ37 374 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 TINAGQ9UJW2 476 aa14.19□□□□□ -0.14
UBAP1-201ENST00000297661 OR6C68A6NDL8 312 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 URADA6NGE7 173 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 EIF4E2O60573 245 aaKnown RBP14.18□□□□□ -0.14
UBAP1-201ENST00000297661 ADH7P40394 386 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CAPZA2P47755 286 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CCDC36Q8IYA8 594 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 MUC20Q8N307 709 aaPredicted RBP14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CSNK1A1LQ8N752 337 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 C1orf216Q8TAB5 229 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 STK35Q8TDR2 534 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 TNFAIP8L1Q8WVP5 186 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 WNT2BQ93097 391 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 FAM60AQ9NP50 221 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 GSN-AS1Q9NRJ2 163 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 SLC22A11Q9NSA0 550 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 OR10H1Q9Y4A9 318 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 IER3IP1Q9Y5U9 82 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CACNA1CQ13936 2221 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 A0A0B4J2E0 115 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 A0A1B0GX12 115 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 TMEM218A2RU14 115 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 A6NCN8 305 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 MCIDASD6RGH6 385 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CLDN12P56749 244 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 FHL1Q13642 323 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 TMEM69Q5SWH9 247 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 SLC16A13Q7RTY0 426 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 OVCH1Q7RTY7 1134 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CA13Q8N1Q1 262 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 ANKRD9Q96BM1 317 aaPredicted RBP14.18□□□□□ -0.14
UBAP1-201ENST00000297661 DNAJA3Q96EY1 480 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 CRB3Q9BUF7 120 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 TMEM138Q9NPI0 162 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 GNG8Q9UK08 70 aa14.18□□□□□ -0.14
UBAP1-201ENST00000297661 H3BSH0 61 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SRFP11831 508 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 PSG6Q00889 435 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 C1orf61Q13536 156 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 CBFBQ13951 182 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 KIRREL2Q6UWL6 708 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 METTL27Q8N6F8 245 aaPredicted RBP14.17□□□□□ -0.14
UBAP1-201ENST00000297661 GATSQ8NAP1 163 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 CCDC3Q9BQI4 270 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 WDR13Q9H1Z4 485 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 PIGMQ9H3S5 423 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 GAREM1Q9H706 876 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 MOKQ9UQ07 419 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 TMEM272A0A1B0GTI8 110 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 A0A1B0GVT2 93 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 TNFSF14O43557 240 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SSX5O60225 188 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 CRYBA1P05813 215 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 ADCYAP1P18509 176 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 ZNF10P21506 573 aaPredicted RBP14.17□□□□□ -0.14
UBAP1-201ENST00000297661 CTHP32929 405 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 ACAA2P42765 397 aaKnown RBP14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SPAG16Q8N0X2 631 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 OR6K6Q8NGW6 343 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 PELI1Q96FA3 418 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SPACA7Q96KW9 195 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 NMNAT3Q96T66 252 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 PDCD10Q9BUL8 212 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SLC25A18Q9H1K4 315 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 NRIP3Q9NQ35 241 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 ANKRD10Q9NXR5 420 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 MYEF2Q9P2K5 600 aaKnown RBP14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SPACA6W5XKT8 324 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 HEATR5AQ86XA9 2040 aa14.17□□□□□ -0.14
UBAP1-201ENST00000297661 SULT1B1O43704 296 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 ZNF806P0C7X5 589 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 RPL4P36578 427 aaKnown RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 DHRS7BQ6IAN0 325 aaPredicted RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 ZNF546Q86UE3 836 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 ZNF433Q8N7K0 673 aaPredicted RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 OR6S1Q8NH40 331 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 S100A16Q96FQ6 103 aaKnown RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 DNAJB12Q9NXW2 375 aaKnown RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 GPN3Q9UHW5 284 aaPredicted RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 FOXJ3Q9UPW0 622 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 SHISA7A6NL88 538 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 RFPL4AA6NLU0 287 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 RFPL4AL1F8VTS6 287 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 TGFBR3LH3BV60 316 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 ACOT7O00154 380 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 SNAPINO95295 136 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 DPP4P27487 766 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 LUMP51884 338 aaPredicted RBP14.16□□□□□ -0.14
UBAP1-201ENST00000297661 PGDP52209 483 aa14.16□□□□□ -0.14
UBAP1-201ENST00000297661 RPS11P62280 158 aaKnown RBP eCLIP14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms