RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 POU2F3Q9UKI9 436 aa10.68□□□□□ -0.7
HMGB2-201ENST00000296503 B3GALT5Q9Y2C3 310 aa10.68□□□□□ -0.7
HMGB2-201ENST00000296503 MAST4O15021 2626 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 CIB4A0PJX0 185 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 FAM221AA4D161 298 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 LRRN3E7EW58 273 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 KRT33AO76009 404 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 LYPD3O95274 346 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 CNOT4O95628 575 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 BGLAPP02818 100 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 GGT1P19440 569 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 YAP1P46937 504 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 ISL1P61371 349 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 PPP2R2BQ00005 443 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 FAM98BQ52LJ0 330 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 CBLL1Q75N03 491 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 WFDC8Q8IUA0 241 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 ZDHHC13Q8IUH4 622 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 TMEM45BQ96B21 275 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 S100PBPQ96BU1 408 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 NSMCE2Q96MF7 247 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 POLR2J2Q9GZM3 115 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 POLR2J3Q9H1A7 115 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 OR10A4Q9H209 315 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 DUSP21Q9H596 190 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 CCNB1IP1Q9NPC3 277 aa10.67□□□□□ -0.7
HMGB2-201ENST00000296503 WARS2Q9UGM6 360 aaKnown RBP10.67□□□□□ -0.7
HMGB2-201ENST00000296503 OR5F1O95221 314 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 CH25HO95992 272 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HIST1H2ABP04908 130 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 IFNW1P05000 195 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 CRYGSP22914 178 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 IGHV1-2P23083 117 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 DNAJA1P31689 397 aaKnown RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 CLDN17P56750 224 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ZNF45Q02386 682 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 STK11Q15831 433 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 IFI44LQ53G44 452 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 TSPO2Q5TGU0 170 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ZNF691Q5VV52 312 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HIST3H2AQ7L7L0 130 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 CDC20BQ86Y33 519 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 LYSMD2Q8IV50 215 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 NKAIN4Q8IVV8 208 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HSD17B8Q92506 261 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HIST1H2ACQ93077 130 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 PIK3IP1Q96FE7 263 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 MOGAT1Q96PD6 335 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 AMBRA1Q9C0C7 1298 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 NDEL1Q9GZM8 345 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 SLIRPQ9GZT3 109 aaKnown RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 RPS6KA6Q9UK32 745 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 MS4A18H0YCH9 400 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 SLC1A7O00341 560 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 IDH3BO43837 385 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 OR6A2O95222 327 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 GOSR1O95249 250 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 MT-ATP6P00846 226 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HRGP04196 525 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 THBDP07204 575 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 AHCYP23526 432 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 CHRNB3Q05901 458 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ST3GAL3Q11203 375 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 MS4A18Q3C1V0 323 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 C9orf135Q5VTT2 229 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 NIPAL3Q6P499 406 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ADCK1Q86TW2 530 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ZNF433Q8N7K0 673 aaPredicted RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 SETD9Q8NE22 299 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ANGPTL6Q8NI99 470 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 GEMIN6Q8WXD5 167 aaKnown RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 RORBQ92753 470 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 HSH2DQ96JZ2 352 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
HMGB2-201ENST00000296503 PRSS27Q9BQR3 290 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 TOR3AQ9H497 397 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 SIAEQ9HAT2 523 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 NANSQ9NR45 359 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 SLC7A10Q9NS82 523 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 TPRKBQ9Y3C4 175 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 ABCA4P78363 2273 aa10.66□□□□□ -0.7
HMGB2-201ENST00000296503 TEX15Q9BXT5 2789 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 G3V2T6 193 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 TPD52L2O43399 206 aaKnown RBP10.65□□□□□ -0.7
HMGB2-201ENST00000296503 TRAPPC2P0DI81 140 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 TRAPPC2BP0DI82 140 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 ADORA3P0DMS8 318 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 SELENOPP49908 381 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 CSNK2BP67870 215 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 EMX1Q04741 257 aaPredicted RBP10.65□□□□□ -0.7
HMGB2-201ENST00000296503 CD47Q08722 323 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 LAIR2Q6ISS4 152 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 PIWIL3Q7Z3Z3 882 aaKnown RBP10.65□□□□□ -0.7
HMGB2-201ENST00000296503 P2RY8Q86VZ1 359 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 UEVLDQ8IX04 471 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 POMGNT2Q8NAT1 580 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 OR5J2Q8NH18 312 aa10.65□□□□□ -0.7
HMGB2-201ENST00000296503 TMEM255BQ8WV15 326 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms