RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 TEX50A0A1B0GTY4 177 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 H3BVH4 76 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 M0R1X1 148 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 SLC16A5O15375 505 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 NAGAP17050 411 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 MMP11P24347 488 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 NLGN4XQ8N0W4 816 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 OR4A16Q8NH70 328 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 JTBO76095 146 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 GLCEO94923 617 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 CD37P11049 281 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 GPR18Q14330 331 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 ADGRE4PQ86SQ3 457 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 PHRF1Q9P1Y6 1649 aaKnown RBP10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 GRXCR2A6NFK2 248 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 CPNE6O95741 557 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 SP2Q02086 613 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM97Q5BJF2 176 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 TXNDC8Q6A555 127 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 TMEM104Q8NE00 496 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 NDUFB11Q9NX14 153 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 HHLA2Q9UM44 414 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 ZNF250P15622 560 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 PPOXP50336 477 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 NXNL2Q5VZ03 156 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 GKN1Q9NS71 199 aa10.9□□□□□ -0.66
SHROOM3-201ENST00000296043 SHC2P98077 582 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM35AQ53FP2 167 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 FUT10Q6P4F1 479 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 OR14A16Q8NHC5 309 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 GPX8Q8TED1 209 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 FAM210BQ96KR6 192 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 GPR87Q9BY21 358 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 MYOTQ9UBF9 498 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 FAM198AQ9UFP1 575 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 DIMT1Q9UNQ2 313 aaKnown RBP10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 SCN5AQ14524 2016 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 SIAH2O43255 324 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 ITGB7P26010 798 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 HSD17B7P56937 341 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 SMAD2Q15796 467 aaKnown RBP10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC14A2Q15849 920 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 ARRDC2Q8TBH0 407 aa10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF443Q9Y2A4 671 aaPredicted RBP10.9□□□□□ -0.67
SHROOM3-201ENST00000296043 SHANK1Q9Y566 2161 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 SDC1P18827 310 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 SIRPAP78324 504 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 FAM24BQ8N5W8 94 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 WRAP73Q9P2S5 460 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PCDHB10Q9UN67 800 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 MED19A0JLT2 244 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 RNASET2O00584 256 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 KIR2DL3P43628 341 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 ZNF718Q3SXZ3 478 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 DYNC2LI1Q8TCX1 351 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 SLC25A21Q9BQT8 299 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 WASHC3Q9Y3C0 194 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 GLYATL3Q5SZD4 288 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 OR4C11Q6IEV9 310 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PLPP7Q8NBV4 271 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 ASB13Q8WXK3 278 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 DDIT4LQ96D03 193 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 KLRG1Q96E93 195 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PAM16Q9Y3D7 125 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 HRO43593 1189 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 NFATC1O95644 943 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 TCEAL1Q15170 157 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 MLF2Q15773 248 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PRAMEF8Q5VWM4 474 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PRAMEF7Q5VXH5 474 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 CMTM2Q8TAZ6 248 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 RBM24Q9BX46 236 aaKnown RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 OR52D1Q9H346 318 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 GPX5O75715 221 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 CXCL14O95715 111 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 SDHBP21912 280 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 OPRD1P41143 372 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 KDM4DQ6B0I6 523 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 C12orf42Q96LP6 360 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 NPAS1Q99742 590 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 GINS3Q9BRX5 216 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PARD6GQ9BYG4 376 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 TMEM269A0A1B0GVZ9 245 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 GABRR3A8MPY1 467 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 TAAR5O14804 337 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 GHRHRQ02643 423 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 NPY5RQ15761 445 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 MIDNQ504T8 468 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 RTL6Q6ICC9 239 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 PSAPL1Q6NUJ1 521 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 KIRREL1Q96J84 757 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 NAA11Q9BSU3 229 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 VSTM2BA6NLU5 285 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 BLVRBP30043 206 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 WDR88Q6ZMY6 472 aa10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 MTHFD2LQ9H903 347 aaPredicted RBP10.89□□□□□ -0.67
SHROOM3-201ENST00000296043 LATO43561 262 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms